Gene: Lncbate1 ENSMUSG00000110613

Description

brown adipose tissue enriched long non-coding RNA 1 [Source:MGI Symbol;Acc:MGI:1924437]

Gene Synonyms

3010033K07Rik, Lnc-BATE1

Location

Chromosome 8: 109,279,883-109,311,847 reverse strand.

GRCm39:CM001001.3

About this gene

This gene has 12 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000211953.4	Lncbate1-201	1211	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000264188.1	Lncbate1-204	1375	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000264190.1	Lncbate1-206	945	No protein	-	lncRNA	-
ENSMUST00000264186.1	Lncbate1-202	844	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000264195.1	Lncbate1-211	828	No protein	-	lncRNA	-
ENSMUST00000264187.1	Lncbate1-203	808	No protein	-	lncRNA	-
ENSMUST00000264191.1	Lncbate1-207	775	No protein	-	lncRNA	-
ENSMUST00000264192.1	Lncbate1-208	711	No protein	-	lncRNA	-
ENSMUST00000264189.1	Lncbate1-205	582	No protein	-	lncRNA	-
ENSMUST00000264194.1	Lncbate1-210	476	No protein	-	lncRNA	-
ENSMUST00000264193.1	Lncbate1-209	446	No protein	-	lncRNA	-
ENSMUST00000264196.1	Lncbate1-212	400	No protein	-	lncRNA	-