Gene: 4933400L20Rik ENSMUSG00000110336

Description

RIKEN cDNA 4933400L20 gene [Source:MGI Symbol;Acc:MGI:1918308]

Location

Chromosome 8: 104,330,368-104,455,251 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 61 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000336124.1	4933400L20Rik-203	593	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336150.1	4933400L20Rik-229	1426	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336147.1	4933400L20Rik-226	1377	No protein	-	lncRNA	-
ENSMUST00000336137.1	4933400L20Rik-216	1293	No protein	-	lncRNA	-
ENSMUST00000336136.1	4933400L20Rik-215	1277	No protein	-	lncRNA	-
ENSMUST00000336161.1	4933400L20Rik-240	1258	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336163.1	4933400L20Rik-242	1253	No protein	-	lncRNA	-
ENSMUST00000336156.1	4933400L20Rik-235	1249	No protein	-	lncRNA	-
ENSMUST00000336143.1	4933400L20Rik-222	1216	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336126.1	4933400L20Rik-205	1210	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336139.1	4933400L20Rik-218	1203	No protein	-	lncRNA	-
ENSMUST00000336133.1	4933400L20Rik-212	1200	No protein	-	lncRNA	-
ENSMUST00000336172.1	4933400L20Rik-251	1193	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336142.1	4933400L20Rik-221	1168	No protein	-	lncRNA	-
ENSMUST00000336130.1	4933400L20Rik-209	1135	No protein	-	lncRNA	-
ENSMUST00000336140.1	4933400L20Rik-219	1086	No protein	-	lncRNA	-
ENSMUST00000336155.1	4933400L20Rik-234	1080	No protein	-	lncRNA	-
ENSMUST00000336168.1	4933400L20Rik-247	1073	No protein	-	lncRNA	-
ENSMUST00000336146.1	4933400L20Rik-225	1063	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336170.1	4933400L20Rik-249	1017	No protein	-	lncRNA	-
ENSMUST00000336176.1	4933400L20Rik-255	996	No protein	-	lncRNA	-
ENSMUST00000336149.1	4933400L20Rik-228	994	No protein	-	lncRNA	-
ENSMUST00000336157.1	4933400L20Rik-236	985	No protein	-	lncRNA	-
ENSMUST00000336141.1	4933400L20Rik-220	984	No protein	-	lncRNA	-
ENSMUST00000336180.1	4933400L20Rik-259	979	No protein	-	lncRNA	-
ENSMUST00000336171.1	4933400L20Rik-250	977	No protein	-	lncRNA	-
ENSMUST00000336144.1	4933400L20Rik-223	966	No protein	-	lncRNA	-
ENSMUST00000336173.1	4933400L20Rik-252	957	No protein	-	lncRNA	-
ENSMUST00000336169.1	4933400L20Rik-248	947	No protein	-	lncRNA	-
ENSMUST00000336167.1	4933400L20Rik-246	940	No protein	-	lncRNA	-
ENSMUST00000336154.1	4933400L20Rik-233	914	No protein	-	lncRNA	-
ENSMUST00000336179.1	4933400L20Rik-258	900	No protein	-	lncRNA	-
ENSMUST00000211119.3	4933400L20Rik-202	899	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000336181.1	4933400L20Rik-260	883	No protein	-	lncRNA	-
ENSMUST00000336165.1	4933400L20Rik-244	857	No protein	-	lncRNA	-
ENSMUST00000336166.1	4933400L20Rik-245	786	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336174.1	4933400L20Rik-253	730	No protein	-	lncRNA	-
ENSMUST00000336178.1	4933400L20Rik-257	724	No protein	-	lncRNA	-
ENSMUST00000336158.1	4933400L20Rik-237	707	No protein	-	lncRNA	-
ENSMUST00000336132.1	4933400L20Rik-211	698	No protein	-	lncRNA	-
ENSMUST00000336160.1	4933400L20Rik-239	698	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336159.1	4933400L20Rik-238	668	No protein	-	lncRNA	-
ENSMUST00000336148.1	4933400L20Rik-227	662	No protein	-	lncRNA	-
ENSMUST00000336152.1	4933400L20Rik-231	653	No protein	-	lncRNA	-
ENSMUST00000336175.1	4933400L20Rik-254	648	No protein	-	lncRNA	-
ENSMUST00000336145.1	4933400L20Rik-224	647	No protein	-	lncRNA	-
ENSMUST00000336135.1	4933400L20Rik-214	634	No protein	-	lncRNA	-
ENSMUST00000336129.1	4933400L20Rik-208	633	No protein	-	lncRNA	-
ENSMUST00000336125.1	4933400L20Rik-204	624	No protein	-	lncRNA	-
ENSMUST00000336134.1	4933400L20Rik-213	588	No protein	-	lncRNA	-
ENSMUST00000336131.1	4933400L20Rik-210	583	No protein	-	lncRNA	-
ENSMUST00000336151.1	4933400L20Rik-230	580	No protein	-	lncRNA	-
ENSMUST00000336127.1	4933400L20Rik-206	561	No protein	-	lncRNA	-
ENSMUST00000336138.1	4933400L20Rik-217	546	No protein	-	lncRNA	-
ENSMUST00000336162.1	4933400L20Rik-241	544	No protein	-	lncRNA	-
ENSMUST00000336128.1	4933400L20Rik-207	539	No protein	-	lncRNA	-
ENSMUST00000336164.1	4933400L20Rik-243	494	No protein	-	lncRNA	-
ENSMUST00000336153.1	4933400L20Rik-232	463	No protein	-	lncRNA	-
ENSMUST00000336182.1	4933400L20Rik-261	463	No protein	-	lncRNA	-
ENSMUST00000336177.1	4933400L20Rik-256	461	No protein	-	lncRNA	-
ENSMUST00000209714.2	4933400L20Rik-201	211	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,