Gene: Gm40293 ENSMUSG00000106794

Description

predicted gene, 40293 [Source:MGI Symbol;Acc:MGI:5623178]

Gene Synonyms

Gm43453

Location

Chromosome 5: 39,346,574-39,496,283 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 50 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000306969.1	Gm40293-202	655	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307015.1	Gm40293-248	1655	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307014.1	Gm40293-247	1438	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307009.1	Gm40293-242	996	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306976.1	Gm40293-209	798	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306975.1	Gm40293-208	767	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306986.1	Gm40293-219	731	No protein	-	lncRNA	-
ENSMUST00000306977.1	Gm40293-210	661	No protein	-	lncRNA	-
ENSMUST00000306996.1	Gm40293-229	660	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306971.1	Gm40293-204	651	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306988.1	Gm40293-221	640	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307005.1	Gm40293-238	640	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306995.1	Gm40293-228	635	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306991.1	Gm40293-224	629	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000306970.1	Gm40293-203	627	No protein	-	lncRNA	-
ENSMUST00000306987.1	Gm40293-220	619	No protein	-	lncRNA	-
ENSMUST00000306994.1	Gm40293-227	613	No protein	-	lncRNA	-
ENSMUST00000306990.1	Gm40293-223	604	No protein	-	lncRNA	-
ENSMUST00000306978.1	Gm40293-211	583	No protein	-	lncRNA	-
ENSMUST00000306974.1	Gm40293-207	567	No protein	-	lncRNA	-
ENSMUST00000307004.1	Gm40293-237	560	No protein	-	lncRNA	-
ENSMUST00000306993.1	Gm40293-226	558	No protein	-	lncRNA	-
ENSMUST00000306989.1	Gm40293-222	554	No protein	-	lncRNA	-
ENSMUST00000307017.1	Gm40293-250	536	No protein	-	lncRNA	-
ENSMUST00000306992.1	Gm40293-225	529	No protein	-	lncRNA	-
ENSMUST00000306983.1	Gm40293-216	511	No protein	-	lncRNA	-
ENSMUST00000306973.1	Gm40293-206	508	No protein	-	lncRNA	-
ENSMUST00000306999.1	Gm40293-232	502	No protein	-	lncRNA	-
ENSMUST00000307011.1	Gm40293-244	490	No protein	-	lncRNA	-
ENSMUST00000202596.2	Gm40293-201	485	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000306980.1	Gm40293-213	481	No protein	-	lncRNA	-
ENSMUST00000307007.1	Gm40293-240	479	No protein	-	lncRNA	-
ENSMUST00000306981.1	Gm40293-214	478	No protein	-	lncRNA	-
ENSMUST00000306972.1	Gm40293-205	466	No protein	-	lncRNA	-
ENSMUST00000307000.1	Gm40293-233	460	No protein	-	lncRNA	-
ENSMUST00000307008.1	Gm40293-241	448	No protein	-	lncRNA	-
ENSMUST00000307012.1	Gm40293-245	439	No protein	-	lncRNA	-
ENSMUST00000307003.1	Gm40293-236	437	No protein	-	lncRNA	-
ENSMUST00000306985.1	Gm40293-218	431	No protein	-	lncRNA	-
ENSMUST00000306984.1	Gm40293-217	425	No protein	-	lncRNA	-
ENSMUST00000307013.1	Gm40293-246	420	No protein	-	lncRNA	-
ENSMUST00000306998.1	Gm40293-231	417	No protein	-	lncRNA	-
ENSMUST00000307016.1	Gm40293-249	394	No protein	-	lncRNA	-
ENSMUST00000306982.1	Gm40293-215	383	No protein	-	lncRNA	-
ENSMUST00000307002.1	Gm40293-235	383	No protein	-	lncRNA	-
ENSMUST00000306997.1	Gm40293-230	381	No protein	-	lncRNA	-
ENSMUST00000306979.1	Gm40293-212	368	No protein	-	lncRNA	-
ENSMUST00000307001.1	Gm40293-234	324	No protein	-	lncRNA	-
ENSMUST00000307006.1	Gm40293-239	322	No protein	-	lncRNA	-
ENSMUST00000307010.1	Gm40293-243	305	No protein	-	lncRNA	-