Gene: Chaer1 ENSMUSG00000106783

Description

cardiac hypertrophy associated epigenetic regulator 1 [Source:MGI Symbol;Acc:MGI:5624990]

Gene Synonyms

Gm42105, Gm42757

Location

Chromosome 5: 77,283,791-77,288,173 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 10 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000240800.1	Chaer1-202	2737	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000201649.3	Chaer1-201	3249	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000245201.1	Chaer1-205	2828	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243776.2	Chaer1-203	2501	No protein	-	lncRNA	-
ENSMUST00000245333.2	Chaer1-206	1717	No protein	-	lncRNA	-
ENSMUST00000244150.2	Chaer1-204	1554	No protein	-	lncRNA	-
ENSMUST00000341448.1	Chaer1-208	1350	No protein	-	lncRNA	-
ENSMUST00000341447.1	Chaer1-207	1338	No protein	-	lncRNA	-
ENSMUST00000341449.1	Chaer1-209	631	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000341450.1	Chaer1-210	467	No protein	-	lncRNA	-