Gene: Gm42488 ENSMUSG00000106060

Description

predicted gene 42488 [Source:MGI Symbol;Acc:MGI:5662625]

Location

Chromosome 5: 112,042,939-112,115,404 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 32 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000286240.1	Gm42488-202	1019	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000197648.3	Gm42488-201	3817	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000286269.1	Gm42488-229	1455	No protein	-	lncRNA	-
ENSMUST00000286256.1	Gm42488-216	1353	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286268.1	Gm42488-228	1285	No protein	-	lncRNA	-
ENSMUST00000286261.1	Gm42488-221	1205	No protein	-	lncRNA	-
ENSMUST00000286263.1	Gm42488-223	1030	No protein	-	lncRNA	-
ENSMUST00000286270.1	Gm42488-230	1014	No protein	-	lncRNA	-
ENSMUST00000286271.1	Gm42488-231	1008	No protein	-	lncRNA	-
ENSMUST00000286242.1	Gm42488-204	967	No protein	-	lncRNA	-
ENSMUST00000286262.1	Gm42488-222	855	No protein	-	lncRNA	-
ENSMUST00000286264.1	Gm42488-224	855	No protein	-	lncRNA	-
ENSMUST00000286241.1	Gm42488-203	843	No protein	-	lncRNA	-
ENSMUST00000286251.1	Gm42488-212	809	No protein	-	lncRNA	-
ENSMUST00000286257.1	Gm42488-217	796	No protein	-	lncRNA	-
ENSMUST00000286253.1	Gm42488-213	795	No protein	-	lncRNA	-
ENSMUST00000286254.1	Gm42488-214	775	No protein	-	lncRNA	-
ENSMUST00000286267.1	Gm42488-227	768	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286259.1	Gm42488-219	747	No protein	-	lncRNA	-
ENSMUST00000286249.1	Gm42488-210	744	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286250.1	Gm42488-211	726	No protein	-	lncRNA	-
ENSMUST00000286255.1	Gm42488-215	720	No protein	-	lncRNA	-
ENSMUST00000286265.1	Gm42488-225	684	No protein	-	lncRNA	-
ENSMUST00000286243.1	Gm42488-205	616	No protein	-	lncRNA	-
ENSMUST00000286272.1	Gm42488-232	615	No protein	-	lncRNA	-
ENSMUST00000286246.1	Gm42488-208	601	No protein	-	lncRNA	-
ENSMUST00000286245.1	Gm42488-207	598	No protein	-	lncRNA	-
ENSMUST00000286266.1	Gm42488-226	580	No protein	-	lncRNA	-
ENSMUST00000286260.1	Gm42488-220	550	No protein	-	lncRNA	-
ENSMUST00000286248.1	Gm42488-209	531	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286244.1	Gm42488-206	508	No protein	-	lncRNA	-
ENSMUST00000286258.1	Gm42488-218	452	No protein	-	lncRNA	-