Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: 4930592C13Rik ENSMUSG00000105834

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Description

RIKEN cDNA 4930592C13 gene [Source:MGI Symbol;Acc:MGI:2686503]

Gene Synonyms

Gm43159, LOC381498

Location

Chromosome 3: 157,233,144-157,240,637 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000255255.1	4930592C13Rik-203	702	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000255257.1	4930592C13Rik-205	1021	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000255256.1	4930592C13Rik-204	984	No protein	-	lncRNA		-
ENSMUST00000196791.3	4930592C13Rik-201	922	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000255258.1	4930592C13Rik-206	810	No protein	-	lncRNA		-
ENSMUST00000255260.1	4930592C13Rik-208	762	No protein	-	lncRNA		-
ENSMUST00000255261.1	4930592C13Rik-209	744	No protein	-	lncRNA		-
ENSMUST00000246981.2	4930592C13Rik-202	736	No protein	-	lncRNA		-
ENSMUST00000255259.1	4930592C13Rik-207	702	No protein	-	lncRNA		-
ENSMUST00000255262.1	4930592C13Rik-210	418	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data