Gene: Gm40117 ENSMUSG00000105355

Description

predicted gene, 40117 [Source:MGI Symbol;Acc:MGI:5623002]

Gene Synonyms

Gm42956

Location

Chromosome 3: 104,875,335-104,927,965 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 45 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000361964.1	Gm40117-202	762	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000361979.1	Gm40117-217	1381	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361998.1	Gm40117-236	1325	No protein	-	lncRNA	-
ENSMUST00000361966.1	Gm40117-204	1183	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361967.1	Gm40117-205	1162	No protein	-	lncRNA	-
ENSMUST00000361969.1	Gm40117-207	1135	No protein	-	lncRNA	-
ENSMUST00000361972.1	Gm40117-210	1061	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361974.1	Gm40117-212	1051	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361983.1	Gm40117-221	1050	No protein	-	lncRNA	-
ENSMUST00000361984.1	Gm40117-222	1048	No protein	-	lncRNA	-
ENSMUST00000361968.1	Gm40117-206	980	No protein	-	lncRNA	-
ENSMUST00000361977.1	Gm40117-215	948	No protein	-	lncRNA	-
ENSMUST00000361978.1	Gm40117-216	944	No protein	-	lncRNA	-
ENSMUST00000361965.1	Gm40117-203	943	No protein	-	lncRNA	-
ENSMUST00000361975.1	Gm40117-213	936	No protein	-	lncRNA	-
ENSMUST00000361986.1	Gm40117-224	929	No protein	-	lncRNA	-
ENSMUST00000361976.1	Gm40117-214	908	No protein	-	lncRNA	-
ENSMUST00000361971.1	Gm40117-209	897	No protein	-	lncRNA	-
ENSMUST00000361973.1	Gm40117-211	894	No protein	-	lncRNA	-
ENSMUST00000361980.1	Gm40117-218	879	No protein	-	lncRNA	-
ENSMUST00000361981.1	Gm40117-219	876	No protein	-	lncRNA	-
ENSMUST00000361991.1	Gm40117-229	874	No protein	-	lncRNA	-
ENSMUST00000361970.1	Gm40117-208	864	No protein	-	lncRNA	-
ENSMUST00000361992.1	Gm40117-230	849	No protein	-	lncRNA	-
ENSMUST00000361982.1	Gm40117-220	827	No protein	-	lncRNA	-
ENSMUST00000361994.1	Gm40117-232	812	No protein	-	lncRNA	-
ENSMUST00000361988.1	Gm40117-226	792	No protein	-	lncRNA	-
ENSMUST00000362002.1	Gm40117-240	760	No protein	-	lncRNA	-
ENSMUST00000361996.1	Gm40117-234	753	No protein	-	lncRNA	-
ENSMUST00000198827.3	Gm40117-201	726	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361985.1	Gm40117-223	684	No protein	-	lncRNA	-
ENSMUST00000361999.1	Gm40117-237	672	No protein	-	lncRNA	-
ENSMUST00000361997.1	Gm40117-235	654	No protein	-	lncRNA	-
ENSMUST00000361993.1	Gm40117-231	643	No protein	-	lncRNA	-
ENSMUST00000362000.1	Gm40117-238	626	No protein	-	lncRNA	-
ENSMUST00000362005.1	Gm40117-243	606	No protein	-	lncRNA	-
ENSMUST00000361989.1	Gm40117-227	594	No protein	-	lncRNA	-
ENSMUST00000361995.1	Gm40117-233	559	No protein	-	lncRNA	-
ENSMUST00000361990.1	Gm40117-228	541	No protein	-	lncRNA	-
ENSMUST00000361987.1	Gm40117-225	527	No protein	-	lncRNA	-
ENSMUST00000362003.1	Gm40117-241	525	No protein	-	lncRNA	-
ENSMUST00000362001.1	Gm40117-239	503	No protein	-	lncRNA	-
ENSMUST00000362004.1	Gm40117-242	424	No protein	-	lncRNA	-
ENSMUST00000362006.1	Gm40117-244	338	No protein	-	lncRNA	-
ENSMUST00000362007.1	Gm40117-245	329	No protein	-	lncRNA	-