Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Gm30735 ENSMUSG00000105168

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Description

predicted gene, 30735 [Source:MGI Symbol;Acc:MGI:5589894]

Gene Synonyms

Gm10727, Gm43565

Location

Chromosome 3: 53,610,830-53,645,247 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000311468.1	Gm30735-206	723	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000199488.4	Gm30735-201	5744	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000311477.1	Gm30735-215	1129	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311476.1	Gm30735-214	1095	No protein	-	lncRNA		-
ENSMUST00000311474.1	Gm30735-212	1081	No protein	-	lncRNA		-
ENSMUST00000243336.2	Gm30735-204	1060	No protein	-	lncRNA		-
ENSMUST00000311475.1	Gm30735-213	1031	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311471.1	Gm30735-209	986	No protein	-	lncRNA		-
ENSMUST00000311478.1	Gm30735-216	942	No protein	-	lncRNA		-
ENSMUST00000243943.2	Gm30735-205	941	No protein	-	lncRNA		-
ENSMUST00000311470.1	Gm30735-208	932	No protein	-	lncRNA		-
ENSMUST00000311480.1	Gm30735-218	914	No protein	-	lncRNA		-
ENSMUST00000241244.2	Gm30735-203	911	No protein	-	lncRNA		-
ENSMUST00000311469.1	Gm30735-207	907	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311473.1	Gm30735-211	773	No protein	-	lncRNA		-
ENSMUST00000241224.2	Gm30735-202	688	No protein	-	lncRNA		-
ENSMUST00000311472.1	Gm30735-210	622	No protein	-	lncRNA		-
ENSMUST00000311479.1	Gm30735-217	602	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data