Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Ontologies
- GO: Anatomical entity
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ID History
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Gene: 4930433J02Rik ENSMUSG00000103478

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Description

RIKEN cDNA 4930433J02 gene [Source:MGI Symbol;Acc:MGI:1921914]

Location

Chromosome 1: 184,818,248-184,832,311 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000263116.1	4930433J02Rik-203	1399	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000263123.1	4930433J02Rik-210	1546	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000194719.3	4930433J02Rik-201	1437	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000263122.1	4930433J02Rik-209	1278	No protein	-	lncRNA		-
ENSMUST00000195649.3	4930433J02Rik-202	1229	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000263120.1	4930433J02Rik-207	1221	No protein	-	lncRNA		-
ENSMUST00000263119.1	4930433J02Rik-206	860	No protein	-	lncRNA		-
ENSMUST00000263118.1	4930433J02Rik-205	857	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000263117.1	4930433J02Rik-204	847	No protein	-	lncRNA		-
ENSMUST00000263121.1	4930433J02Rik-208	638	No protein	-	lncRNA		-
ENSMUST00000263125.1	4930433J02Rik-212	537	No protein	-	lncRNA		-
ENSMUST00000263124.1	4930433J02Rik-211	529	No protein	-	lncRNA		-
ENSMUST00000263126.1	4930433J02Rik-213	490	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data