Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: 1700109G14Rik ENSMUSG00000101505

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Description

RIKEN cDNA 1700109G14 gene [Source:MGI Symbol;Acc:MGI:1914605]

Location

Chromosome 14: 61,529,525-61,555,595 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000188538.2	1700109G14Rik-202	754	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000190737.3	1700109G14Rik-203	1753	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000271022.1	1700109G14Rik-208	1159	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271023.1	1700109G14Rik-209	858	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271018.1	1700109G14Rik-204	840	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271024.1	1700109G14Rik-210	793	No protein	-	lncRNA		-
ENSMUST00000271021.1	1700109G14Rik-207	784	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000186084.3	1700109G14Rik-201	780	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000271029.1	1700109G14Rik-215	726	No protein	-	lncRNA		-
ENSMUST00000271025.1	1700109G14Rik-211	686	No protein	-	lncRNA		-
ENSMUST00000271030.1	1700109G14Rik-216	675	No protein	-	lncRNA		-
ENSMUST00000271026.1	1700109G14Rik-212	657	No protein	-	lncRNA		-
ENSMUST00000271028.1	1700109G14Rik-214	618	No protein	-	lncRNA		-
ENSMUST00000271027.1	1700109G14Rik-213	593	No protein	-	lncRNA		-
ENSMUST00000271019.1	1700109G14Rik-205	445	No protein	-	lncRNA		-
ENSMUST00000271020.1	1700109G14Rik-206	295	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data