Gene: 1700084F23Rik ENSMUSG00000099639

Description

RIKEN cDNA 1700084F23 gene [Source:MGI Symbol;Acc:MGI:1921530]

Location

Chromosome 13: 70,151,862-70,176,512 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 68 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000186662.8	1700084F23Rik-201	1396	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000258692.1	1700084F23Rik-253	1554	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258663.1	1700084F23Rik-224	1512	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258645.1	1700084F23Rik-206	1441	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258689.1	1700084F23Rik-250	1407	No protein	-	lncRNA	-
ENSMUST00000258690.1	1700084F23Rik-251	1383	No protein	-	lncRNA	-
ENSMUST00000258658.1	1700084F23Rik-219	1304	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000189784.3	1700084F23Rik-203	1291	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000258691.1	1700084F23Rik-252	1287	No protein	-	lncRNA	-
ENSMUST00000258652.1	1700084F23Rik-213	1232	No protein	-	lncRNA	-
ENSMUST00000258655.1	1700084F23Rik-216	1229	No protein	-	lncRNA	-
ENSMUST00000258646.1	1700084F23Rik-207	1190	No protein	-	lncRNA	-
ENSMUST00000258654.1	1700084F23Rik-215	1179	No protein	-	lncRNA	-
ENSMUST00000258657.1	1700084F23Rik-218	1168	No protein	-	lncRNA	-
ENSMUST00000258679.1	1700084F23Rik-240	1149	No protein	-	lncRNA	-
ENSMUST00000258656.1	1700084F23Rik-217	1145	No protein	-	lncRNA	-
ENSMUST00000258647.1	1700084F23Rik-208	1144	No protein	-	lncRNA	-
ENSMUST00000258661.1	1700084F23Rik-222	1123	No protein	-	lncRNA	-
ENSMUST00000258674.1	1700084F23Rik-235	1107	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258651.1	1700084F23Rik-212	1078	No protein	-	lncRNA	-
ENSMUST00000258687.1	1700084F23Rik-248	1069	No protein	-	lncRNA	-
ENSMUST00000258653.1	1700084F23Rik-214	1046	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258675.1	1700084F23Rik-236	1022	No protein	-	lncRNA	-
ENSMUST00000258660.1	1700084F23Rik-221	1012	No protein	-	lncRNA	-
ENSMUST00000258688.1	1700084F23Rik-249	1012	No protein	-	lncRNA	-
ENSMUST00000258664.1	1700084F23Rik-225	995	No protein	-	lncRNA	-
ENSMUST00000188461.8	1700084F23Rik-202	980	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000258650.1	1700084F23Rik-211	970	No protein	-	lncRNA	-
ENSMUST00000258659.1	1700084F23Rik-220	947	No protein	-	lncRNA	-
ENSMUST00000258668.1	1700084F23Rik-229	911	No protein	-	lncRNA	-
ENSMUST00000258665.1	1700084F23Rik-226	901	No protein	-	lncRNA	-
ENSMUST00000258667.1	1700084F23Rik-228	888	No protein	-	lncRNA	-
ENSMUST00000189890.8	1700084F23Rik-204	877	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000258669.1	1700084F23Rik-230	864	No protein	-	lncRNA	-
ENSMUST00000258648.1	1700084F23Rik-209	860	No protein	-	lncRNA	-
ENSMUST00000258662.1	1700084F23Rik-223	853	No protein	-	lncRNA	-
ENSMUST00000258683.1	1700084F23Rik-244	789	No protein	-	lncRNA	-
ENSMUST00000191362.3	1700084F23Rik-205	780	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000258649.1	1700084F23Rik-210	773	No protein	-	lncRNA	-
ENSMUST00000258696.1	1700084F23Rik-257	725	No protein	-	lncRNA	-
ENSMUST00000258681.1	1700084F23Rik-242	721	No protein	-	lncRNA	-
ENSMUST00000258682.1	1700084F23Rik-243	696	No protein	-	lncRNA	-
ENSMUST00000258666.1	1700084F23Rik-227	695	No protein	-	lncRNA	-
ENSMUST00000258693.1	1700084F23Rik-254	684	No protein	-	lncRNA	-
ENSMUST00000258673.1	1700084F23Rik-234	680	No protein	-	lncRNA	-
ENSMUST00000258684.1	1700084F23Rik-245	661	No protein	-	lncRNA	-
ENSMUST00000258670.1	1700084F23Rik-231	659	No protein	-	lncRNA	-
ENSMUST00000258671.1	1700084F23Rik-232	644	No protein	-	lncRNA	-
ENSMUST00000258695.1	1700084F23Rik-256	644	No protein	-	lncRNA	-
ENSMUST00000258677.1	1700084F23Rik-238	620	No protein	-	lncRNA	-
ENSMUST00000258676.1	1700084F23Rik-237	593	No protein	-	lncRNA	-
ENSMUST00000258694.1	1700084F23Rik-255	580	No protein	-	lncRNA	-
ENSMUST00000258672.1	1700084F23Rik-233	562	No protein	-	lncRNA	-
ENSMUST00000258697.1	1700084F23Rik-258	561	No protein	-	lncRNA	-
ENSMUST00000258707.1	1700084F23Rik-268	558	No protein	-	lncRNA	-
ENSMUST00000258701.1	1700084F23Rik-262	547	No protein	-	lncRNA	-
ENSMUST00000258698.1	1700084F23Rik-259	534	No protein	-	lncRNA	-
ENSMUST00000258686.1	1700084F23Rik-247	522	No protein	-	lncRNA	-
ENSMUST00000258700.1	1700084F23Rik-261	521	No protein	-	lncRNA	-
ENSMUST00000258699.1	1700084F23Rik-260	519	No protein	-	lncRNA	-
ENSMUST00000258685.1	1700084F23Rik-246	513	No protein	-	lncRNA	-
ENSMUST00000258680.1	1700084F23Rik-241	466	No protein	-	lncRNA	-
ENSMUST00000258678.1	1700084F23Rik-239	447	No protein	-	lncRNA	-
ENSMUST00000258702.1	1700084F23Rik-263	401	No protein	-	lncRNA	-
ENSMUST00000258703.1	1700084F23Rik-264	377	No protein	-	lncRNA	-
ENSMUST00000258705.1	1700084F23Rik-266	327	No protein	-	lncRNA	-
ENSMUST00000258704.1	1700084F23Rik-265	305	No protein	-	lncRNA	-
ENSMUST00000258706.1	1700084F23Rik-267	297	No protein	-	lncRNA	-