Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: 4921515E04Rik ENSMUSG00000098150

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Description

RIKEN cDNA 4921515E04 gene [Source:MGI Symbol;Acc:MGI:1918136]

Location

Chromosome 15: 18,078,204-18,369,739 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 11 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000228926.2	4921515E04Rik-204	1105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
ENSMUST00000227364.2	4921515E04Rik-203	2309	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000226383.2	4921515E04Rik-202	1738	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287749.1	4921515E04Rik-205	1284	No protein	-	lncRNA		-
ENSMUST00000287751.1	4921515E04Rik-207	1270	No protein	-	lncRNA		-
ENSMUST00000287754.1	4921515E04Rik-210	1245	No protein	-	lncRNA		-
ENSMUST00000183117.3	4921515E04Rik-201	1227	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000287750.1	4921515E04Rik-206	1073	No protein	-	lncRNA		-
ENSMUST00000287752.1	4921515E04Rik-208	1035	No protein	-	lncRNA		-
ENSMUST00000287755.1	4921515E04Rik-211	948	No protein	-	lncRNA		-
ENSMUST00000287753.1	4921515E04Rik-209	915	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data