Gene: 1700029N11Rik ENSMUSG00000098144

Description

RIKEN cDNA 1700029N11 gene [Source:MGI Symbol;Acc:MGI:1916741]

Location

Chromosome 13: 44,593,146-44,622,506 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 39 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000381266.1	1700029N11Rik-204	974	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000381277.1	1700029N11Rik-215	1303	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381298.1	1700029N11Rik-236	1160	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381272.1	1700029N11Rik-210	1133	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381276.1	1700029N11Rik-214	1097	No protein	-	lncRNA	-
ENSMUST00000220639.2	1700029N11Rik-203	1092	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000381273.1	1700029N11Rik-211	1090	No protein	-	lncRNA	-
ENSMUST00000381282.1	1700029N11Rik-220	1069	No protein	-	lncRNA	-
ENSMUST00000381284.1	1700029N11Rik-222	1039	No protein	-	lncRNA	-
ENSMUST00000381267.1	1700029N11Rik-205	1038	No protein	-	lncRNA	-
ENSMUST00000381279.1	1700029N11Rik-217	1035	No protein	-	lncRNA	-
ENSMUST00000381280.1	1700029N11Rik-218	1020	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381285.1	1700029N11Rik-223	1020	No protein	-	lncRNA	-
ENSMUST00000381286.1	1700029N11Rik-224	1020	No protein	-	lncRNA	-
ENSMUST00000381281.1	1700029N11Rik-219	1017	No protein	-	lncRNA	-
ENSMUST00000381274.1	1700029N11Rik-212	1002	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381278.1	1700029N11Rik-216	951	No protein	-	lncRNA	-
ENSMUST00000381283.1	1700029N11Rik-221	949	No protein	-	lncRNA	-
ENSMUST00000381275.1	1700029N11Rik-213	926	No protein	-	lncRNA	-
ENSMUST00000381291.1	1700029N11Rik-229	807	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381270.1	1700029N11Rik-208	787	No protein	-	lncRNA	-
ENSMUST00000381271.1	1700029N11Rik-209	778	No protein	-	lncRNA	-
ENSMUST00000381269.1	1700029N11Rik-207	762	No protein	-	lncRNA	-
ENSMUST00000381268.1	1700029N11Rik-206	761	No protein	-	lncRNA	-
ENSMUST00000381294.1	1700029N11Rik-232	676	No protein	-	lncRNA	-
ENSMUST00000381290.1	1700029N11Rik-228	655	No protein	-	lncRNA	-
ENSMUST00000381295.1	1700029N11Rik-233	654	No protein	-	lncRNA	-
ENSMUST00000381293.1	1700029N11Rik-231	649	No protein	-	lncRNA	-
ENSMUST00000182568.4	1700029N11Rik-201	626	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000381288.1	1700029N11Rik-226	616	No protein	-	lncRNA	-
ENSMUST00000381289.1	1700029N11Rik-227	602	No protein	-	lncRNA	-
ENSMUST00000190628.8	1700029N11Rik-202	594	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000381299.1	1700029N11Rik-237	593	No protein	-	lncRNA	-
ENSMUST00000381287.1	1700029N11Rik-225	522	No protein	-	lncRNA	-
ENSMUST00000381292.1	1700029N11Rik-230	485	No protein	-	lncRNA	-
ENSMUST00000381300.1	1700029N11Rik-238	477	No protein	-	lncRNA	-
ENSMUST00000381296.1	1700029N11Rik-234	369	No protein	-	lncRNA	-
ENSMUST00000381301.1	1700029N11Rik-239	331	No protein	-	lncRNA	-
ENSMUST00000381297.1	1700029N11Rik-235	216	No protein	-	lncRNA	-