Gene: 4933404O12Rik ENSMUSG00000097908

Description

RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]

Location

Chromosome 5: 136,944,735-136,965,968 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 46 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000368688.1	4933404O12Rik-207	1104	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181190.3	4933404O12Rik-202	4058	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000181045.10	4933404O12Rik-201	4006	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000368724.1	4933404O12Rik-243	1643	No protein	-	lncRNA	-
ENSMUST00000368689.1	4933404O12Rik-208	1340	No protein	-	lncRNA	-
ENSMUST00000368693.1	4933404O12Rik-212	1252	No protein	-	lncRNA	-
ENSMUST00000368696.1	4933404O12Rik-215	1144	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000197095.7	4933404O12Rik-203	1141	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000244857.2	4933404O12Rik-205	1057	No protein	-	lncRNA	-
ENSMUST00000368706.1	4933404O12Rik-225	1030	No protein	-	lncRNA	-
ENSMUST00000368695.1	4933404O12Rik-214	1027	No protein	-	lncRNA	-
ENSMUST00000368699.1	4933404O12Rik-218	1016	No protein	-	lncRNA	-
ENSMUST00000368691.1	4933404O12Rik-210	1001	No protein	-	lncRNA	-
ENSMUST00000368705.1	4933404O12Rik-224	974	No protein	-	lncRNA	-
ENSMUST00000368700.1	4933404O12Rik-219	957	No protein	-	lncRNA	-
ENSMUST00000368692.1	4933404O12Rik-211	955	No protein	-	lncRNA	-
ENSMUST00000368704.1	4933404O12Rik-223	940	No protein	-	lncRNA	-
ENSMUST00000368710.1	4933404O12Rik-229	930	No protein	-	lncRNA	-
ENSMUST00000245597.2	4933404O12Rik-206	919	No protein	-	lncRNA	-
ENSMUST00000368701.1	4933404O12Rik-220	900	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000368702.1	4933404O12Rik-221	869	No protein	-	lncRNA	-
ENSMUST00000368698.1	4933404O12Rik-217	862	No protein	-	lncRNA	-
ENSMUST00000368713.1	4933404O12Rik-232	852	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000368697.1	4933404O12Rik-216	846	No protein	-	lncRNA	-
ENSMUST00000368712.1	4933404O12Rik-231	846	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000368707.1	4933404O12Rik-226	819	No protein	-	lncRNA	-
ENSMUST00000368690.1	4933404O12Rik-209	810	No protein	-	lncRNA	-
ENSMUST00000199264.5	4933404O12Rik-204	803	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000368703.1	4933404O12Rik-222	800	No protein	-	lncRNA	-
ENSMUST00000368723.1	4933404O12Rik-242	775	No protein	-	lncRNA	-
ENSMUST00000368694.1	4933404O12Rik-213	762	No protein	-	lncRNA	-
ENSMUST00000368715.1	4933404O12Rik-234	746	No protein	-	lncRNA	-
ENSMUST00000368718.1	4933404O12Rik-237	730	No protein	-	lncRNA	-
ENSMUST00000368708.1	4933404O12Rik-227	726	No protein	-	lncRNA	-
ENSMUST00000368717.1	4933404O12Rik-236	709	No protein	-	lncRNA	-
ENSMUST00000368714.1	4933404O12Rik-233	691	No protein	-	lncRNA	-
ENSMUST00000368711.1	4933404O12Rik-230	675	No protein	-	lncRNA	-
ENSMUST00000368727.1	4933404O12Rik-246	638	No protein	-	lncRNA	-
ENSMUST00000368721.1	4933404O12Rik-240	613	No protein	-	lncRNA	-
ENSMUST00000368719.1	4933404O12Rik-238	577	No protein	-	lncRNA	-
ENSMUST00000368716.1	4933404O12Rik-235	558	No protein	-	lncRNA	-
ENSMUST00000368722.1	4933404O12Rik-241	549	No protein	-	lncRNA	-
ENSMUST00000368709.1	4933404O12Rik-228	504	No protein	-	lncRNA	-
ENSMUST00000368725.1	4933404O12Rik-244	471	No protein	-	lncRNA	-
ENSMUST00000368726.1	4933404O12Rik-245	450	No protein	-	lncRNA	-
ENSMUST00000368720.1	4933404O12Rik-239	437	No protein	-	lncRNA	-