Gene: 9530059O14Rik ENSMUSG00000097736

Description

RIKEN cDNA 9530059O14 gene [Source:MGI Symbol;Acc:MGI:2442421]

Location

Chromosome 9: 122,397,495-122,541,477 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 45 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000278186.1	9530059O14Rik-207	1109	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181107.2	9530059O14Rik-201	3978	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000181719.3	9530059O14Rik-203	2880	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000181682.9	9530059O14Rik-202	2093	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000278195.1	9530059O14Rik-216	1687	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000278200.1	9530059O14Rik-221	1683	No protein	-	lncRNA	-
ENSMUST00000215759.2	9530059O14Rik-206	1606	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000278191.1	9530059O14Rik-212	1511	No protein	-	lncRNA	-
ENSMUST00000278193.1	9530059O14Rik-214	1485	No protein	-	lncRNA	-
ENSMUST00000278197.1	9530059O14Rik-218	1474	No protein	-	lncRNA	-
ENSMUST00000278192.1	9530059O14Rik-213	1424	No protein	-	lncRNA	-
ENSMUST00000278198.1	9530059O14Rik-219	1399	No protein	-	lncRNA	-
ENSMUST00000278196.1	9530059O14Rik-217	1371	No protein	-	lncRNA	-
ENSMUST00000213492.3	9530059O14Rik-204	1175	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000278212.1	9530059O14Rik-233	1162	No protein	-	lncRNA	-
ENSMUST00000278187.1	9530059O14Rik-208	1102	No protein	-	lncRNA	-
ENSMUST00000278190.1	9530059O14Rik-211	1027	No protein	-	lncRNA	-
ENSMUST00000279232.1	9530059O14Rik-243	1003	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000278188.1	9530059O14Rik-209	1000	No protein	-	lncRNA	-
ENSMUST00000278194.1	9530059O14Rik-215	927	No protein	-	lncRNA	-
ENSMUST00000278220.1	9530059O14Rik-241	848	No protein	-	lncRNA	-
ENSMUST00000278189.1	9530059O14Rik-210	846	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279233.1	9530059O14Rik-244	793	No protein	-	lncRNA	-
ENSMUST00000278211.1	9530059O14Rik-232	753	No protein	-	lncRNA	-
ENSMUST00000278206.1	9530059O14Rik-227	711	No protein	-	lncRNA	-
ENSMUST00000278199.1	9530059O14Rik-220	706	No protein	-	lncRNA	-
ENSMUST00000278208.1	9530059O14Rik-229	701	No protein	-	lncRNA	-
ENSMUST00000215101.3	9530059O14Rik-205	692	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000278214.1	9530059O14Rik-235	615	No protein	-	lncRNA	-
ENSMUST00000278202.1	9530059O14Rik-223	610	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000278217.1	9530059O14Rik-238	597	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000278216.1	9530059O14Rik-237	594	No protein	-	lncRNA	-
ENSMUST00000278209.1	9530059O14Rik-230	584	No protein	-	lncRNA	-
ENSMUST00000278215.1	9530059O14Rik-236	571	No protein	-	lncRNA	-
ENSMUST00000278219.1	9530059O14Rik-240	569	No protein	-	lncRNA	-
ENSMUST00000278204.1	9530059O14Rik-225	557	No protein	-	lncRNA	-
ENSMUST00000278218.1	9530059O14Rik-239	527	No protein	-	lncRNA	-
ENSMUST00000278210.1	9530059O14Rik-231	516	No protein	-	lncRNA	-
ENSMUST00000278203.1	9530059O14Rik-224	509	No protein	-	lncRNA	-
ENSMUST00000278201.1	9530059O14Rik-222	501	No protein	-	lncRNA	-
ENSMUST00000278205.1	9530059O14Rik-226	493	No protein	-	lncRNA	-
ENSMUST00000278207.1	9530059O14Rik-228	478	No protein	-	lncRNA	-
ENSMUST00000278213.1	9530059O14Rik-234	397	No protein	-	lncRNA	-
ENSMUST00000278221.1	9530059O14Rik-242	352	No protein	-	lncRNA	-
ENSMUST00000279234.1	9530059O14Rik-245	180	No protein	-	lncRNA	-