Summary
- Splice variants
- Transcript comparison
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- GO: Anatomical entity
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Gene: Gm16754 ENSMUSG00000097439

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Description

predicted gene, 16754 [Source:MGI Symbol;Acc:MGI:4439678]

Location

Chromosome 9: 21,136,416-21,144,504 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000242437.2	Gm16754-204	797	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181222.8	Gm16754-201	2302	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000193875.7	Gm16754-203	1438	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279858.1	Gm16754-207	1307	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279859.1	Gm16754-208	976	No protein	-	lncRNA		-
ENSMUST00000279861.1	Gm16754-210	941	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279866.1	Gm16754-215	890	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000193429.4	Gm16754-202	853	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279864.1	Gm16754-213	732	No protein	-	lncRNA		-
ENSMUST00000279862.1	Gm16754-211	706	No protein	-	lncRNA		-
ENSMUST00000279856.1	Gm16754-205	702	No protein	-	lncRNA		-
ENSMUST00000279857.1	Gm16754-206	696	No protein	-	lncRNA		-
ENSMUST00000279868.1	Gm16754-217	657	No protein	-	lncRNA		-
ENSMUST00000279860.1	Gm16754-209	608	No protein	-	lncRNA		-
ENSMUST00000279863.1	Gm16754-212	572	No protein	-	lncRNA		-
ENSMUST00000279865.1	Gm16754-214	377	No protein	-	lncRNA		-
ENSMUST00000279867.1	Gm16754-216	300	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data