Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Gene: 4732491K20Rik ENSMUSG00000097350

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Description

RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]

Location

Chromosome 17: 12,537,640-12,555,858 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000241544.2	4732491K20Rik-204	2084	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181774.5	4732491K20Rik-201	3218	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000240961.2	4732491K20Rik-202	2231	No protein	-	lncRNA		-
ENSMUST00000241450.2	4732491K20Rik-203	1906	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000264731.1	4732491K20Rik-216	1387	No protein	-	lncRNA		-
ENSMUST00000264732.1	4732491K20Rik-217	1346	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000264730.1	4732491K20Rik-215	1335	No protein	-	lncRNA		-
ENSMUST00000264728.1	4732491K20Rik-213	1320	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000264723.1	4732491K20Rik-208	1256	No protein	-	lncRNA		-
ENSMUST00000242478.2	4732491K20Rik-206	1140	No protein	-	lncRNA		-
ENSMUST00000264724.1	4732491K20Rik-209	983	No protein	-	lncRNA		-
ENSMUST00000264726.1	4732491K20Rik-211	768	No protein	-	lncRNA		-
ENSMUST00000264727.1	4732491K20Rik-212	686	No protein	-	lncRNA		-
ENSMUST00000264733.1	4732491K20Rik-218	675	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242173.2	4732491K20Rik-205	643	No protein	-	lncRNA		-
ENSMUST00000264725.1	4732491K20Rik-210	636	No protein	-	lncRNA		-
ENSMUST00000264722.1	4732491K20Rik-207	477	No protein	-	lncRNA		-
ENSMUST00000264729.1	4732491K20Rik-214	234	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data