Gene: Mir9-3hg ENSMUSG00000097023

Description

Mir9-3 host gene [Source:MGI Symbol;Acc:MGI:2142071]

Gene Synonyms

AI854517, BS-DRL1

Location

Chromosome 7: 79,146,444-79,184,154 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 74 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000181511.11	Mir9-3hg-202	3457	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000279436.1	Mir9-3hg-227	3387	No protein	-	lncRNA	-
ENSMUST00000279451.1	Mir9-3hg-242	2114	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000182317.3	Mir9-3hg-204	2011	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279452.1	Mir9-3hg-243	1988	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279450.1	Mir9-3hg-241	1971	No protein	-	lncRNA	-
ENSMUST00000279448.1	Mir9-3hg-239	1916	No protein	-	lncRNA	-
ENSMUST00000279461.1	Mir9-3hg-252	1916	No protein	-	lncRNA	-
ENSMUST00000279471.1	Mir9-3hg-262	1899	No protein	-	lncRNA	-
ENSMUST00000180881.4	Mir9-3hg-201	1878	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000182125.3	Mir9-3hg-203	1873	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000279446.1	Mir9-3hg-237	1865	No protein	-	lncRNA	-
ENSMUST00000243003.1	Mir9-3hg-211	1856	No protein	-	lncRNA	-
ENSMUST00000279474.1	Mir9-3hg-265	1855	No protein	-	lncRNA	-
ENSMUST00000279459.1	Mir9-3hg-250	1853	No protein	-	lncRNA	-
ENSMUST00000279449.1	Mir9-3hg-240	1843	No protein	-	lncRNA	-
ENSMUST00000182937.9	Mir9-3hg-206	1837	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279440.1	Mir9-3hg-231	1829	No protein	-	lncRNA	-
ENSMUST00000279433.1	Mir9-3hg-224	1828	No protein	-	lncRNA	-
ENSMUST00000279454.1	Mir9-3hg-245	1809	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279468.1	Mir9-3hg-259	1803	No protein	-	lncRNA	-
ENSMUST00000279437.1	Mir9-3hg-228	1801	No protein	-	lncRNA	-
ENSMUST00000279462.1	Mir9-3hg-253	1801	No protein	-	lncRNA	-
ENSMUST00000279447.1	Mir9-3hg-238	1783	No protein	-	lncRNA	-
ENSMUST00000279429.1	Mir9-3hg-220	1763	No protein	-	lncRNA	-
ENSMUST00000279453.1	Mir9-3hg-244	1762	No protein	-	lncRNA	-
ENSMUST00000245375.2	Mir9-3hg-216	1752	No protein	-	lncRNA	-
ENSMUST00000279467.1	Mir9-3hg-258	1752	No protein	-	lncRNA	-
ENSMUST00000244756.2	Mir9-3hg-214	1747	No protein	-	lncRNA	-
ENSMUST00000243775.1	Mir9-3hg-213	1745	No protein	-	lncRNA	-
ENSMUST00000279456.1	Mir9-3hg-247	1744	No protein	-	lncRNA	-
ENSMUST00000279442.1	Mir9-3hg-233	1734	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279430.1	Mir9-3hg-221	1730	No protein	-	lncRNA	-
ENSMUST00000183043.9	Mir9-3hg-207	1726	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279463.1	Mir9-3hg-254	1714	No protein	-	lncRNA	-
ENSMUST00000279445.1	Mir9-3hg-236	1707	No protein	-	lncRNA	-
ENSMUST00000279438.1	Mir9-3hg-229	1689	No protein	-	lncRNA	-
ENSMUST00000279443.1	Mir9-3hg-234	1675	No protein	-	lncRNA	-
ENSMUST00000245978.2	Mir9-3hg-217	1673	No protein	-	lncRNA	-
ENSMUST00000241622.2	Mir9-3hg-209	1665	No protein	-	lncRNA	-
ENSMUST00000279432.1	Mir9-3hg-223	1659	No protein	-	lncRNA	-
ENSMUST00000245987.2	Mir9-3hg-218	1658	No protein	-	lncRNA	-
ENSMUST00000279444.1	Mir9-3hg-235	1652	No protein	-	lncRNA	-
ENSMUST00000279455.1	Mir9-3hg-246	1648	No protein	-	lncRNA	-
ENSMUST00000242603.2	Mir9-3hg-210	1645	No protein	-	lncRNA	-
ENSMUST00000245191.2	Mir9-3hg-215	1637	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279458.1	Mir9-3hg-249	1637	No protein	-	lncRNA	-
ENSMUST00000279460.1	Mir9-3hg-251	1633	No protein	-	lncRNA	-
ENSMUST00000182495.3	Mir9-3hg-205	1631	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000279464.1	Mir9-3hg-255	1628	No protein	-	lncRNA	-
ENSMUST00000243717.2	Mir9-3hg-212	1599	No protein	-	lncRNA	-
ENSMUST00000279439.1	Mir9-3hg-230	1591	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241386.1	Mir9-3hg-208	1578	No protein	-	lncRNA	-
ENSMUST00000279466.1	Mir9-3hg-257	1568	No protein	-	lncRNA	-
ENSMUST00000279472.1	Mir9-3hg-263	1566	No protein	-	lncRNA	-
ENSMUST00000279431.1	Mir9-3hg-222	1556	No protein	-	lncRNA	-
ENSMUST00000279428.1	Mir9-3hg-219	1536	No protein	-	lncRNA	-
ENSMUST00000279457.1	Mir9-3hg-248	1479	No protein	-	lncRNA	-
ENSMUST00000279473.1	Mir9-3hg-264	1479	No protein	-	lncRNA	-
ENSMUST00000279441.1	Mir9-3hg-232	1463	No protein	-	lncRNA	-
ENSMUST00000279479.1	Mir9-3hg-270	997	No protein	-	lncRNA	-
ENSMUST00000279434.1	Mir9-3hg-225	841	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279435.1	Mir9-3hg-226	731	No protein	-	lncRNA	-
ENSMUST00000279481.1	Mir9-3hg-272	708	No protein	-	lncRNA	-
ENSMUST00000279470.1	Mir9-3hg-261	645	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279476.1	Mir9-3hg-267	606	No protein	-	lncRNA	-
ENSMUST00000279469.1	Mir9-3hg-260	454	No protein	-	lncRNA	-
ENSMUST00000279480.1	Mir9-3hg-271	436	No protein	-	lncRNA	-
ENSMUST00000279478.1	Mir9-3hg-269	395	No protein	-	lncRNA	-
ENSMUST00000279482.1	Mir9-3hg-273	357	No protein	-	lncRNA	-
ENSMUST00000279483.1	Mir9-3hg-274	351	No protein	-	lncRNA	-
ENSMUST00000279465.1	Mir9-3hg-256	343	No protein	-	lncRNA	-
ENSMUST00000279475.1	Mir9-3hg-266	326	No protein	-	lncRNA	-
ENSMUST00000279477.1	Mir9-3hg-268	221	No protein	-	lncRNA	-