Gene: 1700113A16Rik ENSMUSG00000096935

Description

RIKEN cDNA 1700113A16 gene [Source:MGI Symbol;Acc:MGI:1923892]

Location

Chromosome 3: 88,073,104-88,085,502 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 22 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000361014.1	1700113A16Rik-205	577	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000243498.2	1700113A16Rik-204	1582	No protein	-	lncRNA	-
ENSMUST00000200006.3	1700113A16Rik-203	1333	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000181837.5	1700113A16Rik-201	1280	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000361017.1	1700113A16Rik-208	1179	No protein	-	lncRNA	-
ENSMUST00000361031.1	1700113A16Rik-222	1154	No protein	-	lncRNA	-
ENSMUST00000361018.1	1700113A16Rik-209	1135	No protein	-	lncRNA	-
ENSMUST00000197172.7	1700113A16Rik-202	1113	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000361015.1	1700113A16Rik-206	1087	No protein	-	lncRNA	-
ENSMUST00000361021.1	1700113A16Rik-212	963	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361016.1	1700113A16Rik-207	957	No protein	-	lncRNA	-
ENSMUST00000361022.1	1700113A16Rik-213	956	No protein	-	lncRNA	-
ENSMUST00000361019.1	1700113A16Rik-210	953	No protein	-	lncRNA	-
ENSMUST00000361020.1	1700113A16Rik-211	904	No protein	-	lncRNA	-
ENSMUST00000361030.1	1700113A16Rik-221	857	No protein	-	lncRNA	-
ENSMUST00000361025.1	1700113A16Rik-216	608	No protein	-	lncRNA	-
ENSMUST00000361028.1	1700113A16Rik-219	544	No protein	-	lncRNA	-
ENSMUST00000361024.1	1700113A16Rik-215	518	No protein	-	lncRNA	-
ENSMUST00000361027.1	1700113A16Rik-218	454	No protein	-	lncRNA	-
ENSMUST00000361023.1	1700113A16Rik-214	451	No protein	-	lncRNA	-
ENSMUST00000361026.1	1700113A16Rik-217	410	No protein	-	lncRNA	-
ENSMUST00000361029.1	1700113A16Rik-220	402	No protein	-	lncRNA	-