Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm8024 ENSMUSG00000095318

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Description

predicted gene 8024 [Source:MGI Symbol;Acc:MGI:3647989]

Location

Chromosome 14: 42,340,822-42,365,219 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 5 transcripts (splice variants), 8 orthologues and 154 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000249546.1	Gm8024-203	2071	178aa	ENSMUSP00000159787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AA74KT10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000249547.1	Gm8024-204	2191	100aa	ENSMUSP00000159788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AA74KUS5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000249544.1	Gm8024-201	1704	178aa	ENSMUSP00000159785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AA74KT10	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000249548.1	Gm8024-205	1864	77aa	ENSMUSP00000159789.1	Nonsense mediated decay		A0AA74KSQ0	-
ENSMUST00000249545.1	Gm8024-202	1824	87aa	ENSMUSP00000159786.1	Nonsense mediated decay		A0AA74KT74	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data