Summary
- Splice variants
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- Gene alleles
Sequence
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Comparative Genomics
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Gene: Lncob1 ENSMUSG00000092381

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Description

lncRNA osteoblastogenesis associated 1 [Source:MGI Symbol;Acc:MGI:5141977]

Gene Synonyms

Gm20512, lnc-Ob1

Location

Chromosome 7: 19,448,904-19,455,665 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 7 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000172483.3	Lncob1-201	664	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000254208.1	Lncob1-202	640	No protein	-	lncRNA		-
ENSMUST00000254209.1	Lncob1-203	592	No protein	-	lncRNA		-
ENSMUST00000254211.1	Lncob1-205	539	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254213.1	Lncob1-207	495	No protein	-	lncRNA		-
ENSMUST00000254210.1	Lncob1-204	471	No protein	-	lncRNA		-
ENSMUST00000254212.1	Lncob1-206	407	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data