Gene: Slmapos2 ENSMUSG00000090104

Description

sarcolemma associated protein, opposite strand transcript 2 [Source:MGI Symbol;Acc:MGI:3801907]

Gene Synonyms

Gm16241

Location

Chromosome 14: 26,077,479-26,121,611 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 60 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000059648.10	Slmapos2-202	3387	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000250018.1	Slmapos2-209	3387	No protein	-	lncRNA	-
ENSMUST00000160089.2	Slmapos2-204	2194	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000331021.1	Slmapos2-219	2171	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000168234.10	Slmapos2-206	1606	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000331015.1	Slmapos2-213	1578	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331014.1	Slmapos2-212	1574	No protein	-	lncRNA	-
ENSMUST00000331016.1	Slmapos2-214	1485	No protein	-	lncRNA	-
ENSMUST00000331023.1	Slmapos2-221	1474	No protein	-	lncRNA	-
ENSMUST00000240935.1	Slmapos2-208	1303	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250020.1	Slmapos2-211	1231	No protein	-	lncRNA	-
ENSMUST00000250019.1	Slmapos2-210	1154	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331017.1	Slmapos2-215	1057	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331024.1	Slmapos2-222	971	No protein	-	lncRNA	-
ENSMUST00000331019.1	Slmapos2-217	963	No protein	-	lncRNA	-
ENSMUST00000331029.1	Slmapos2-227	942	No protein	-	lncRNA	-
ENSMUST00000331020.1	Slmapos2-218	926	No protein	-	lncRNA	-
ENSMUST00000331028.1	Slmapos2-226	921	No protein	-	lncRNA	-
ENSMUST00000331018.1	Slmapos2-216	908	No protein	-	lncRNA	-
ENSMUST00000331039.1	Slmapos2-237	906	No protein	-	lncRNA	-
ENSMUST00000022427.9	Slmapos2-201	899	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000331026.1	Slmapos2-224	896	No protein	-	lncRNA	-
ENSMUST00000170881.4	Slmapos2-207	872	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000331058.1	Slmapos2-256	870	No protein	-	lncRNA	-
ENSMUST00000331035.1	Slmapos2-233	856	No protein	-	lncRNA	-
ENSMUST00000331051.1	Slmapos2-249	855	No protein	-	lncRNA	-
ENSMUST00000331054.1	Slmapos2-252	854	No protein	-	lncRNA	-
ENSMUST00000159700.8	Slmapos2-203	853	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000331030.1	Slmapos2-228	849	No protein	-	lncRNA	-
ENSMUST00000331056.1	Slmapos2-254	848	No protein	-	lncRNA	-
ENSMUST00000331034.1	Slmapos2-232	837	No protein	-	lncRNA	-
ENSMUST00000331032.1	Slmapos2-230	817	No protein	-	lncRNA	-
ENSMUST00000331044.1	Slmapos2-242	813	No protein	-	lncRNA	-
ENSMUST00000331037.1	Slmapos2-235	811	No protein	-	lncRNA	-
ENSMUST00000331027.1	Slmapos2-225	803	No protein	-	lncRNA	-
ENSMUST00000331041.1	Slmapos2-239	801	No protein	-	lncRNA	-
ENSMUST00000331045.1	Slmapos2-243	800	No protein	-	lncRNA	-
ENSMUST00000331053.1	Slmapos2-251	798	No protein	-	lncRNA	-
ENSMUST00000331060.1	Slmapos2-258	785	No protein	-	lncRNA	-
ENSMUST00000331025.1	Slmapos2-223	778	No protein	-	lncRNA	-
ENSMUST00000331033.1	Slmapos2-231	763	No protein	-	lncRNA	-
ENSMUST00000331036.1	Slmapos2-234	757	No protein	-	lncRNA	-
ENSMUST00000331040.1	Slmapos2-238	746	No protein	-	lncRNA	-
ENSMUST00000331055.1	Slmapos2-253	746	No protein	-	lncRNA	-
ENSMUST00000160661.8	Slmapos2-205	739	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000331050.1	Slmapos2-248	732	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331046.1	Slmapos2-244	731	No protein	-	lncRNA	-
ENSMUST00000331031.1	Slmapos2-229	726	No protein	-	lncRNA	-
ENSMUST00000331043.1	Slmapos2-241	716	No protein	-	lncRNA	-
ENSMUST00000331059.1	Slmapos2-257	705	No protein	-	lncRNA	-
ENSMUST00000331049.1	Slmapos2-247	696	No protein	-	lncRNA	-
ENSMUST00000331038.1	Slmapos2-236	658	No protein	-	lncRNA	-
ENSMUST00000331048.1	Slmapos2-246	658	No protein	-	lncRNA	-
ENSMUST00000331047.1	Slmapos2-245	636	No protein	-	lncRNA	-
ENSMUST00000331042.1	Slmapos2-240	624	No protein	-	lncRNA	-
ENSMUST00000331057.1	Slmapos2-255	608	No protein	-	lncRNA	-
ENSMUST00000331052.1	Slmapos2-250	577	No protein	-	lncRNA	-
ENSMUST00000331022.1	Slmapos2-220	532	No protein	-	lncRNA	-
ENSMUST00000331062.1	Slmapos2-260	500	No protein	-	lncRNA	-
ENSMUST00000331061.1	Slmapos2-259	463	No protein	-	lncRNA	-