Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: Gm15283 ENSMUSG00000087700

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Description

predicted gene 15283 [Source:MGI Symbol;Acc:MGI:3705161]

Location

Chromosome 12: 73,889,811-73,996,735 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000319563.1	Gm15283-205	937	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000125308.4	Gm15283-201	1465	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000319567.1	Gm15283-209	1031	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319569.1	Gm15283-211	1017	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000221427.3	Gm15283-202	846	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000247207.2	Gm15283-204	819	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319565.1	Gm15283-207	672	No protein	-	lncRNA		-
ENSMUST00000319564.1	Gm15283-206	648	No protein	-	lncRNA		-
ENSMUST00000319566.1	Gm15283-208	634	No protein	-	lncRNA		-
ENSMUST00000319570.1	Gm15283-212	626	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000319572.1	Gm15283-214	616	No protein	-	lncRNA		-
ENSMUST00000222217.3	Gm15283-203	602	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000319573.1	Gm15283-215	524	No protein	-	lncRNA		-
ENSMUST00000319571.1	Gm15283-213	515	No protein	-	lncRNA		-
ENSMUST00000319574.1	Gm15283-216	469	No protein	-	lncRNA		-
ENSMUST00000319576.1	Gm15283-218	468	No protein	-	lncRNA		-
ENSMUST00000319575.1	Gm15283-217	434	No protein	-	lncRNA		-
ENSMUST00000319568.1	Gm15283-210	337	No protein	-	lncRNA		-
ENSMUST00000319577.1	Gm15283-219	230	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data