Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm15518 ENSMUSG00000087066

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Description

predicted gene 15518 [Source:MGI Symbol;Acc:MGI:3801752]

Location

Chromosome 16: 49,578,939-49,619,233 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 19 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000127115.2	Gm15518-201	2108	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000284535.1	Gm15518-219	1901	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284525.1	Gm15518-209	666	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284518.1	Gm15518-202	625	No protein	-	lncRNA		-
ENSMUST00000284526.1	Gm15518-210	579	No protein	-	lncRNA		-
ENSMUST00000284527.1	Gm15518-211	472	No protein	-	lncRNA		-
ENSMUST00000284529.1	Gm15518-213	465	No protein	-	lncRNA		-
ENSMUST00000284520.1	Gm15518-204	450	No protein	-	lncRNA		-
ENSMUST00000284519.1	Gm15518-203	437	No protein	-	lncRNA		-
ENSMUST00000284534.1	Gm15518-218	426	No protein	-	lncRNA		-
ENSMUST00000284531.1	Gm15518-215	400	No protein	-	lncRNA		-
ENSMUST00000284528.1	Gm15518-212	379	No protein	-	lncRNA		-
ENSMUST00000284523.1	Gm15518-207	359	No protein	-	lncRNA		-
ENSMUST00000284521.1	Gm15518-205	322	No protein	-	lncRNA		-
ENSMUST00000284533.1	Gm15518-217	305	No protein	-	lncRNA		-
ENSMUST00000284522.1	Gm15518-206	299	No protein	-	lncRNA		-
ENSMUST00000284532.1	Gm15518-216	298	No protein	-	lncRNA		-
ENSMUST00000284530.1	Gm15518-214	291	No protein	-	lncRNA		-
ENSMUST00000284524.1	Gm15518-208	254	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data