Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: Phf2os1 ENSMUSG00000086889

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Description

PHD finger protein 2, opposite strand 1 [Source:MGI Symbol;Acc:MGI:3645592]

Gene Synonyms

Gm8619

Location

Chromosome 13: 49,024,092-49,030,170 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000292183.1	Phf2os1-202	894	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292188.1	Phf2os1-207	986	No protein	-	lncRNA		-
ENSMUST00000292196.1	Phf2os1-215	910	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292190.1	Phf2os1-209	892	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292189.1	Phf2os1-208	875	No protein	-	lncRNA		-
ENSMUST00000292191.1	Phf2os1-210	859	No protein	-	lncRNA		-
ENSMUST00000292184.1	Phf2os1-203	851	No protein	-	lncRNA		-
ENSMUST00000292186.1	Phf2os1-205	784	No protein	-	lncRNA		-
ENSMUST00000292195.1	Phf2os1-214	775	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292187.1	Phf2os1-206	748	No protein	-	lncRNA		-
ENSMUST00000292197.1	Phf2os1-216	724	No protein	-	lncRNA		-
ENSMUST00000292194.1	Phf2os1-213	701	No protein	-	lncRNA		-
ENSMUST00000292185.1	Phf2os1-204	674	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292192.1	Phf2os1-211	653	No protein	-	lncRNA		-
ENSMUST00000123212.2	Phf2os1-201	498	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000292193.1	Phf2os1-212	439	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data