Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm11482 ENSMUSG00000086817

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Description

predicted gene 11482 [Source:MGI Symbol;Acc:MGI:3652238]

Location

Chromosome 4: 63,549,272-63,663,342 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000376385.1	Gm11482-202	836	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000376391.1	Gm11482-208	905	No protein	-	lncRNA		-
ENSMUST00000147067.3	Gm11482-201	789	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000376386.1	Gm11482-203	776	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000376387.1	Gm11482-204	761	No protein	-	lncRNA		-
ENSMUST00000376388.1	Gm11482-205	753	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000376392.1	Gm11482-209	725	No protein	-	lncRNA		-
ENSMUST00000376390.1	Gm11482-207	692	No protein	-	lncRNA		-
ENSMUST00000376402.1	Gm11482-219	678	No protein	-	lncRNA		-
ENSMUST00000376396.1	Gm11482-213	616	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000376393.1	Gm11482-210	609	No protein	-	lncRNA		-
ENSMUST00000376389.1	Gm11482-206	602	No protein	-	lncRNA		-
ENSMUST00000376397.1	Gm11482-214	546	No protein	-	lncRNA		-
ENSMUST00000376399.1	Gm11482-216	523	No protein	-	lncRNA		-
ENSMUST00000376400.1	Gm11482-217	515	No protein	-	lncRNA		-
ENSMUST00000376401.1	Gm11482-218	408	No protein	-	lncRNA		-
ENSMUST00000376394.1	Gm11482-211	387	No protein	-	lncRNA		-
ENSMUST00000376395.1	Gm11482-212	316	No protein	-	lncRNA		-
ENSMUST00000376398.1	Gm11482-215	284	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data