Summary
- Splice variants
- Transcript comparison
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Gene: 4930571N24Rik ENSMUSG00000086467

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Description

RIKEN cDNA 4930571N24 gene [Source:MGI Symbol;Acc:MGI:1925474]

Location

Chromosome 15: 77,312,159-77,347,678 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000132871.3	4930571N24Rik-201	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000338508.1	4930571N24Rik-204	818	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000338510.1	4930571N24Rik-206	857	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338509.1	4930571N24Rik-205	848	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229381.2	4930571N24Rik-203	669	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000142914.3	4930571N24Rik-202	612	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000338518.1	4930571N24Rik-214	611	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338512.1	4930571N24Rik-208	609	No protein	-	lncRNA		-
ENSMUST00000338519.1	4930571N24Rik-215	499	No protein	-	lncRNA		-
ENSMUST00000338513.1	4930571N24Rik-209	487	No protein	-	lncRNA		-
ENSMUST00000338517.1	4930571N24Rik-213	470	No protein	-	lncRNA		-
ENSMUST00000338511.1	4930571N24Rik-207	463	No protein	-	lncRNA		-
ENSMUST00000338515.1	4930571N24Rik-211	395	No protein	-	lncRNA		-
ENSMUST00000338514.1	4930571N24Rik-210	383	No protein	-	lncRNA		-
ENSMUST00000338516.1	4930571N24Rik-212	371	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data