Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Gm15966 ENSMUSG00000085865

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Description

predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]

Location

Chromosome 16: 91,068,665-91,125,938 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000232580.3	Gm15966-209	468	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000136853.3	Gm15966-201	1478	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000231983.3	Gm15966-206	1126	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232206.2	Gm15966-208	928	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000376417.1	Gm15966-216	887	No protein	-	lncRNA		-
ENSMUST00000376418.1	Gm15966-217	871	No protein	-	lncRNA		-
ENSMUST00000376412.1	Gm15966-211	664	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232074.3	Gm15966-207	610	No protein	-	lncRNA		-
ENSMUST00000376416.1	Gm15966-215	604	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231371.3	Gm15966-204	547	No protein	-	lncRNA		-
ENSMUST00000376415.1	Gm15966-214	538	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231271.2	Gm15966-203	523	No protein	-	lncRNA		-
ENSMUST00000376413.1	Gm15966-212	478	No protein	-	lncRNA		-
ENSMUST00000376414.1	Gm15966-213	454	No protein	-	lncRNA		-
ENSMUST00000231982.3	Gm15966-205	445	No protein	-	lncRNA		-
ENSMUST00000376411.1	Gm15966-210	444	No protein	-	lncRNA		-
ENSMUST00000376419.1	Gm15966-218	301	No protein	-	lncRNA		-
ENSMUST00000146994.2	Gm15966-202	204	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data