Gene: Gm11789 ENSMUSG00000084983

Description

predicted gene 11789 [Source:MGI Symbol;Acc:MGI:3650495]

Location

Chromosome 11: 120,416,803-120,422,756 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 40 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000301540.1	Gm11789-209	1462	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000123579.4	Gm11789-201	2743	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000139357.10	Gm11789-202	1775	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000140989.3	Gm11789-204	1633	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000301560.1	Gm11789-229	1581	No protein	-	lncRNA	-
ENSMUST00000301561.1	Gm11789-230	1297	No protein	-	lncRNA	-
ENSMUST00000140645.4	Gm11789-203	1237	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000245134.2	Gm11789-207	1190	No protein	-	lncRNA	-
ENSMUST00000301546.1	Gm11789-215	1161	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301558.1	Gm11789-227	1099	No protein	-	lncRNA	-
ENSMUST00000301545.1	Gm11789-214	1086	No protein	-	lncRNA	-
ENSMUST00000242835.2	Gm11789-206	1084	No protein	-	lncRNA	-
ENSMUST00000301543.1	Gm11789-212	1045	No protein	-	lncRNA	-
ENSMUST00000301544.1	Gm11789-213	1030	No protein	-	lncRNA	-
ENSMUST00000246023.2	Gm11789-208	1029	No protein	-	lncRNA	-
ENSMUST00000301567.1	Gm11789-236	1010	No protein	-	lncRNA	-
ENSMUST00000301542.1	Gm11789-211	1006	No protein	-	lncRNA	-
ENSMUST00000301554.1	Gm11789-223	982	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301556.1	Gm11789-225	974	No protein	-	lncRNA	-
ENSMUST00000301562.1	Gm11789-231	958	No protein	-	lncRNA	-
ENSMUST00000301566.1	Gm11789-235	957	No protein	-	lncRNA	-
ENSMUST00000301563.1	Gm11789-232	937	No protein	-	lncRNA	-
ENSMUST00000301548.1	Gm11789-217	917	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301553.1	Gm11789-222	869	No protein	-	lncRNA	-
ENSMUST00000301564.1	Gm11789-233	867	No protein	-	lncRNA	-
ENSMUST00000301565.1	Gm11789-234	855	No protein	-	lncRNA	-
ENSMUST00000301549.1	Gm11789-218	853	No protein	-	lncRNA	-
ENSMUST00000301555.1	Gm11789-224	853	No protein	-	lncRNA	-
ENSMUST00000301547.1	Gm11789-216	785	No protein	-	lncRNA	-
ENSMUST00000301568.1	Gm11789-237	782	No protein	-	lncRNA	-
ENSMUST00000148579.4	Gm11789-205	772	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000301557.1	Gm11789-226	760	No protein	-	lncRNA	-
ENSMUST00000301570.1	Gm11789-239	725	No protein	-	lncRNA	-
ENSMUST00000301551.1	Gm11789-220	719	No protein	-	lncRNA	-
ENSMUST00000301541.1	Gm11789-210	711	No protein	-	lncRNA	-
ENSMUST00000301550.1	Gm11789-219	623	No protein	-	lncRNA	-
ENSMUST00000301552.1	Gm11789-221	589	No protein	-	lncRNA	-
ENSMUST00000301571.1	Gm11789-240	511	No protein	-	lncRNA	-
ENSMUST00000301569.1	Gm11789-238	510	No protein	-	lncRNA	-
ENSMUST00000301559.1	Gm11789-228	406	No protein	-	lncRNA	-