Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm12092 ENSMUSG00000084850

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Description

predicted gene 12092 [Source:MGI Symbol;Acc:MGI:3650092]

Location

Chromosome 11: 29,556,659-29,595,899 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000320879.1	Gm12092-202	1216	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000320882.1	Gm12092-205	1415	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320881.1	Gm12092-204	1231	No protein	-	lncRNA		-
ENSMUST00000320883.1	Gm12092-206	1203	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320880.1	Gm12092-203	1121	No protein	-	lncRNA		-
ENSMUST00000320885.1	Gm12092-208	934	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320889.1	Gm12092-212	903	No protein	-	lncRNA		-
ENSMUST00000125194.3	Gm12092-201	865	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000320891.1	Gm12092-214	828	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320884.1	Gm12092-207	766	No protein	-	lncRNA		-
ENSMUST00000320893.1	Gm12092-216	737	No protein	-	lncRNA		-
ENSMUST00000320886.1	Gm12092-209	698	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320890.1	Gm12092-213	666	No protein	-	lncRNA		-
ENSMUST00000320887.1	Gm12092-210	626	No protein	-	lncRNA		-
ENSMUST00000320888.1	Gm12092-211	532	No protein	-	lncRNA		-
ENSMUST00000320892.1	Gm12092-215	506	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data