Gene: 1700110I01Rik ENSMUSG00000079407

Description

RIKEN cDNA 1700110I01 gene [Source:MGI Symbol;Acc:MGI:1920799]

Gene Synonyms

Gm2938

Location

Chromosome 14: 19,146,176-19,207,440 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 28 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000328374.1	1700110I01Rik-207	1226	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000112812.8	1700110I01Rik-202	1737	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000328385.1	1700110I01Rik-218	1695	No protein	-	lncRNA	-
ENSMUST00000328387.1	1700110I01Rik-220	1689	No protein	-	lncRNA	-
ENSMUST00000328384.1	1700110I01Rik-217	1673	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000112775.3	1700110I01Rik-201	1671	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000328388.1	1700110I01Rik-221	1663	No protein	-	lncRNA	-
ENSMUST00000328390.1	1700110I01Rik-223	1594	No protein	-	lncRNA	-
ENSMUST00000179153.3	1700110I01Rik-204	1593	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000188883.3	1700110I01Rik-206	1590	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000328389.1	1700110I01Rik-222	1564	No protein	-	lncRNA	-
ENSMUST00000328380.1	1700110I01Rik-213	1557	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000328376.1	1700110I01Rik-209	1455	No protein	-	lncRNA	-
ENSMUST00000328377.1	1700110I01Rik-210	1452	No protein	-	lncRNA	-
ENSMUST00000328393.1	1700110I01Rik-226	1417	No protein	-	lncRNA	-
ENSMUST00000328386.1	1700110I01Rik-219	1396	No protein	-	lncRNA	-
ENSMUST00000328375.1	1700110I01Rik-208	1359	No protein	-	lncRNA	-
ENSMUST00000328379.1	1700110I01Rik-212	1280	No protein	-	lncRNA	-
ENSMUST00000328391.1	1700110I01Rik-224	1049	No protein	-	lncRNA	-
ENSMUST00000328378.1	1700110I01Rik-211	1010	No protein	-	lncRNA	-
ENSMUST00000328381.1	1700110I01Rik-214	872	No protein	-	lncRNA	-
ENSMUST00000328394.1	1700110I01Rik-227	778	No protein	-	lncRNA	-
ENSMUST00000328382.1	1700110I01Rik-215	777	No protein	-	lncRNA	-
ENSMUST00000328383.1	1700110I01Rik-216	730	No protein	-	lncRNA	-
ENSMUST00000168543.4	1700110I01Rik-203	729	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000328395.1	1700110I01Rik-228	675	No protein	-	lncRNA	-
ENSMUST00000328392.1	1700110I01Rik-225	669	No protein	-	lncRNA	-
ENSMUST00000186836.2	1700110I01Rik-205	350	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,