Gene: Rasgrp3 ENSMUSG00000071042

Description

RAS, guanyl releasing protein 3 [Source:MGI Symbol;Acc:MGI:3028579]

Gene Synonyms

LOC240168

Location

Chromosome 17: 75,742,891-75,836,049 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 7 transcripts (splice variants), 196 orthologues, 38 paralogues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000095204.6	Rasgrp3-201	4720	691aa	ENSMUSP00000092828.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37695	Q6NZH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000164192.9	Rasgrp3-202	4655	691aa	ENSMUSP00000129393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37695	Q6NZH9	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234011.2	Rasgrp3-203	518	69aa	ENSMUSP00000156978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EG32	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234660.2	Rasgrp3-206	390	56aa	ENSMUSP00000157183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC09	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234644.2	Rasgrp3-205	565	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235103.2	Rasgrp3-207	439	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234640.2	Rasgrp3-204	391	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-