Gene: E330013P04Rik ENSMUSG00000053117

Description

RIKEN cDNA E330013P04 gene [Source:MGI Symbol;Acc:MGI:2147732]

Gene Synonyms

ln-CR9

Location

Chromosome 19: 60,130,093-60,160,007 forward strand.

GRCm39:CM001012.3

About this gene

This gene has 27 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000261699.1	E330013P04Rik-215	549	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000065383.13	E330013P04Rik-201	3030	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000190698.2	E330013P04Rik-203	2996	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000190409.3	E330013P04Rik-202	2284	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000242456.1	E330013P04Rik-206	1912	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241475.1	E330013P04Rik-205	1911	No protein	-	lncRNA	-
ENSMUST00000243152.1	E330013P04Rik-208	1773	No protein	-	lncRNA	-
ENSMUST00000244078.1	E330013P04Rik-211	1732	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244194.1	E330013P04Rik-212	1623	No protein	-	lncRNA	-
ENSMUST00000243188.1	E330013P04Rik-210	1561	No protein	-	lncRNA	-
ENSMUST00000244451.2	E330013P04Rik-213	1294	No protein	-	lncRNA	-
ENSMUST00000261711.1	E330013P04Rik-227	1214	No protein	-	lncRNA	-
ENSMUST00000261703.1	E330013P04Rik-219	1119	No protein	-	lncRNA	-
ENSMUST00000261704.1	E330013P04Rik-220	846	No protein	-	lncRNA	-
ENSMUST00000261701.1	E330013P04Rik-217	838	No protein	-	lncRNA	-
ENSMUST00000244672.2	E330013P04Rik-214	810	No protein	-	lncRNA	-
ENSMUST00000261702.1	E330013P04Rik-218	786	No protein	-	lncRNA	-
ENSMUST00000261706.1	E330013P04Rik-222	777	No protein	-	lncRNA	-
ENSMUST00000261709.1	E330013P04Rik-225	741	No protein	-	lncRNA	-
ENSMUST00000261700.1	E330013P04Rik-216	719	No protein	-	lncRNA	-
ENSMUST00000261708.1	E330013P04Rik-224	711	No protein	-	lncRNA	-
ENSMUST00000261705.1	E330013P04Rik-221	704	No protein	-	lncRNA	-
ENSMUST00000261707.1	E330013P04Rik-223	682	No protein	-	lncRNA	-
ENSMUST00000242894.2	E330013P04Rik-207	668	No protein	-	lncRNA	-
ENSMUST00000243171.2	E330013P04Rik-209	636	No protein	-	lncRNA	-
ENSMUST00000235893.2	E330013P04Rik-204	439	No protein	-	lncRNA	-
ENSMUST00000261710.1	E330013P04Rik-226	383	No protein	-	lncRNA	-