Gene: Prokr2 ENSMUSG00000050558

Description

prokineticin receptor 2 [Source:MGI Symbol;Acc:MGI:2181363]

Gene Synonyms

B830005M06Rik, EG-VEGRF2, Gpcr73l1, Gpr73l1, PKR2

Location

Chromosome 2: 132,179,653-132,227,367 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 5 transcripts (splice variants), 123 orthologues, 55 paralogues and is associated with 32 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000049997.14	Prokr2-201	4486	381aa	ENSMUSP00000056659.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16773	Q8K458	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110157.9	Prokr2-203	4005	198aa	ENSMUSP00000105785.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AMQ7	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000142766.2	Prokr2-204	3932	220aa	ENSMUSP00000124526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E0CY28	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110156.2	Prokr2-202	3829	381aa	ENSMUSP00000105784.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16773	Q8K458	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000145995.2	Prokr2-205	345	17aa	ENSMUSP00000115564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AMQ9	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Prokr2 ENSMUSG00000050558

Strains

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Gene: Prokr2 ENSMUSG00000050558

Strains

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