Gene: A630023P12Rik ENSMUSG00000048215

Description

RIKEN cDNA A630023P12 gene [Source:MGI Symbol;Acc:MGI:2445162]

Location

Chromosome 5: 110,615,121-110,684,763 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 41 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000347794.1	A630023P12Rik-240	1432	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000347765.1	A630023P12Rik-211	2224	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000142879.3	A630023P12Rik-204	1714	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000347777.1	A630023P12Rik-223	1709	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347790.1	A630023P12Rik-236	1656	No protein	-	lncRNA	-
ENSMUST00000347770.1	A630023P12Rik-216	1653	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347766.1	A630023P12Rik-212	1621	No protein	-	lncRNA	-
ENSMUST00000347767.1	A630023P12Rik-213	1606	No protein	-	lncRNA	-
ENSMUST00000347768.1	A630023P12Rik-214	1600	No protein	-	lncRNA	-
ENSMUST00000347771.1	A630023P12Rik-217	1595	No protein	-	lncRNA	-
ENSMUST00000347774.1	A630023P12Rik-220	1561	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347781.1	A630023P12Rik-227	1528	No protein	-	lncRNA	-
ENSMUST00000347772.1	A630023P12Rik-218	1493	No protein	-	lncRNA	-
ENSMUST00000347775.1	A630023P12Rik-221	1487	No protein	-	lncRNA	-
ENSMUST00000347782.1	A630023P12Rik-228	1474	No protein	-	lncRNA	-
ENSMUST00000347788.1	A630023P12Rik-234	1454	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347780.1	A630023P12Rik-226	1446	No protein	-	lncRNA	-
ENSMUST00000347769.1	A630023P12Rik-215	1423	No protein	-	lncRNA	-
ENSMUST00000347787.1	A630023P12Rik-233	1422	No protein	-	lncRNA	-
ENSMUST00000347778.1	A630023P12Rik-224	1417	No protein	-	lncRNA	-
ENSMUST00000245394.2	A630023P12Rik-209	1408	No protein	-	lncRNA	-
ENSMUST00000347785.1	A630023P12Rik-231	1367	No protein	-	lncRNA	-
ENSMUST00000141420.3	A630023P12Rik-202	1344	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000347783.1	A630023P12Rik-229	1335	No protein	-	lncRNA	-
ENSMUST00000347773.1	A630023P12Rik-219	1313	No protein	-	lncRNA	-
ENSMUST00000243989.2	A630023P12Rik-208	1307	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347786.1	A630023P12Rik-232	1291	No protein	-	lncRNA	-
ENSMUST00000347776.1	A630023P12Rik-222	1265	No protein	-	lncRNA	-
ENSMUST00000243427.1	A630023P12Rik-207	1261	No protein	-	lncRNA	-
ENSMUST00000241142.1	A630023P12Rik-206	1248	No protein	-	lncRNA	-
ENSMUST00000347784.1	A630023P12Rik-230	1229	No protein	-	lncRNA	-
ENSMUST00000129007.2	A630023P12Rik-201	1221	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000347792.1	A630023P12Rik-238	1215	No protein	-	lncRNA	-
ENSMUST00000347789.1	A630023P12Rik-235	1189	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347764.1	A630023P12Rik-210	1003	No protein	-	lncRNA	-
ENSMUST00000347791.1	A630023P12Rik-237	820	No protein	-	lncRNA	-
ENSMUST00000347779.1	A630023P12Rik-225	761	No protein	-	lncRNA	-
ENSMUST00000196681.3	A630023P12Rik-205	669	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000347795.1	A630023P12Rik-241	663	No protein	-	lncRNA	-
ENSMUST00000347793.1	A630023P12Rik-239	642	No protein	-	lncRNA	-
ENSMUST00000141532.8	A630023P12Rik-203	638	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,