Gene: Crtac1 ENSMUSG00000042401

Description

cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]

Gene Synonyms

2810454P21Rik, Crtac1B, Lotus

Location

Chromosome 19: 42,256,726-42,420,224 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 3 transcripts (splice variants), 255 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238290.2	Crtac1-203	2164	652aa	ENSMUSP00000158623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BE99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000048630.8	Crtac1-201	2618	646aa	ENSMUSP00000044858.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29828	Q8R555	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238182.2	Crtac1-202	395	87aa	ENSMUSP00000158328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB57	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,