Gene: Cd226 ENSMUSG00000034028

Description

CD226 antigen [Source:MGI Symbol;Acc:MGI:3039602]

Gene Synonyms

DNAM-1, DNAM1, Pta1, TLiSA1

Location

Chromosome 18: 89,195,091-89,290,353 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 10 transcripts (splice variants), 184 orthologues, 15 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000236828.2	Cd226-207	4494	333aa	ENSMUSP00000158324.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29392	Q5DW69 Q8K4F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000037142.13	Cd226-201	2487	333aa	ENSMUSP00000043551.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29392	Q5DW69 Q8K4F0	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000097496.4	Cd226-202	1239	220aa	ENSMUSP00000095104.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29391	Q8K4E3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236452.2	Cd226-205	742	129aa	ENSMUSP00000158239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8K4E2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000236835.2	Cd226-208	451	119aa	ENSMUSP00000158454.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000236644.2	Cd226-206	446	38aa	ENSMUSP00000158110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAJ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000237110.2	Cd226-209	408	24aa	ENSMUSP00000158575.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBL3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000235651.2	Cd226-203	2456	154aa	ENSMUSP00000158334.2	Nonsense mediated decay		A0A494BB66	-
ENSMUST00000237979.2	Cd226-210	1364	187aa	ENSMUSP00000157554.2	Nonsense mediated decay		Q8K4E4	-
ENSMUST00000236450.2	Cd226-204	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-