Gene: Crnde ENSMUSG00000031736

Description

colorectal neoplasia differentially expressed, non-protein coding [Source:MGI Symbol;Acc:MGI:1918546]

Gene Synonyms

4933436C20Rik

Location

Chromosome 8: 93,038,763-93,084,336 reverse strand.

GRCm39:CM001001.3

About this gene

This gene has 168 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000347336.1	Crnde-242	1502	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244851.1	Crnde-229	2357	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347367.1	Crnde-272	2279	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347448.1	Crnde-353	2203	No protein	-	lncRNA	-
ENSMUST00000242560.1	Crnde-215	1695	No protein	-	lncRNA	-
ENSMUST00000347445.1	Crnde-350	1677	No protein	-	lncRNA	-
ENSMUST00000347340.1	Crnde-246	1670	No protein	-	lncRNA	-
ENSMUST00000347440.1	Crnde-345	1664	No protein	-	lncRNA	-
ENSMUST00000244684.2	Crnde-225	1625	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347444.1	Crnde-349	1553	No protein	-	lncRNA	-
ENSMUST00000347342.1	Crnde-248	1479	No protein	-	lncRNA	-
ENSMUST00000347391.1	Crnde-296	1445	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347442.1	Crnde-347	1438	No protein	-	lncRNA	-
ENSMUST00000179400.3	Crnde-205	1433	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000245809.2	Crnde-234	1427	No protein	-	lncRNA	-
ENSMUST00000347376.1	Crnde-281	1389	No protein	-	lncRNA	-
ENSMUST00000241895.2	Crnde-213	1376	No protein	-	lncRNA	-
ENSMUST00000347395.1	Crnde-300	1360	No protein	-	lncRNA	-
ENSMUST00000246350.2	Crnde-239	1356	No protein	-	lncRNA	-
ENSMUST00000347366.1	Crnde-271	1350	No protein	-	lncRNA	-
ENSMUST00000347341.1	Crnde-247	1349	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347374.1	Crnde-279	1346	No protein	-	lncRNA	-
ENSMUST00000347378.1	Crnde-283	1327	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347441.1	Crnde-346	1321	No protein	-	lncRNA	-
ENSMUST00000178064.11	Crnde-202	1296	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000347373.1	Crnde-278	1289	No protein	-	lncRNA	-
ENSMUST00000179222.3	Crnde-204	1279	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000347339.1	Crnde-245	1276	No protein	-	lncRNA	-
ENSMUST00000347363.1	Crnde-268	1271	No protein	-	lncRNA	-
ENSMUST00000034183.11	Crnde-201	1245	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000347419.1	Crnde-324	1244	No protein	-	lncRNA	-
ENSMUST00000347348.1	Crnde-254	1242	No protein	-	lncRNA	-
ENSMUST00000347421.1	Crnde-326	1241	No protein	-	lncRNA	-
ENSMUST00000347446.1	Crnde-351	1234	No protein	-	lncRNA	-
ENSMUST00000347420.1	Crnde-325	1223	No protein	-	lncRNA	-
ENSMUST00000347417.1	Crnde-322	1210	No protein	-	lncRNA	-
ENSMUST00000347399.1	Crnde-304	1201	No protein	-	lncRNA	-
ENSMUST00000347463.1	Crnde-368	1185	No protein	-	lncRNA	-
ENSMUST00000347443.1	Crnde-348	1179	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244120.2	Crnde-223	1178	No protein	-	lncRNA	-
ENSMUST00000347407.1	Crnde-312	1178	No protein	-	lncRNA	-
ENSMUST00000347361.1	Crnde-266	1177	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245594.1	Crnde-233	1175	No protein	-	lncRNA	-
ENSMUST00000347365.1	Crnde-270	1175	No protein	-	lncRNA	-
ENSMUST00000244183.2	Crnde-224	1174	No protein	-	lncRNA	-
ENSMUST00000347449.1	Crnde-354	1173	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347372.1	Crnde-277	1170	No protein	-	lncRNA	-
ENSMUST00000347385.1	Crnde-290	1167	No protein	-	lncRNA	-
ENSMUST00000347384.1	Crnde-289	1161	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347392.1	Crnde-297	1161	No protein	-	lncRNA	-
ENSMUST00000347424.1	Crnde-329	1147	No protein	-	lncRNA	-
ENSMUST00000347393.1	Crnde-298	1146	No protein	-	lncRNA	-
ENSMUST00000245512.1	Crnde-232	1139	No protein	-	lncRNA	-
ENSMUST00000347390.1	Crnde-295	1138	No protein	-	lncRNA	-
ENSMUST00000347425.1	Crnde-330	1130	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347408.1	Crnde-313	1127	No protein	-	lncRNA	-
ENSMUST00000243067.2	Crnde-217	1126	No protein	-	lncRNA	-
ENSMUST00000347394.1	Crnde-299	1125	No protein	-	lncRNA	-
ENSMUST00000244972.2	Crnde-230	1122	No protein	-	lncRNA	-
ENSMUST00000347406.1	Crnde-311	1122	No protein	-	lncRNA	-
ENSMUST00000241658.2	Crnde-211	1117	No protein	-	lncRNA	-
ENSMUST00000244812.2	Crnde-228	1111	No protein	-	lncRNA	-
ENSMUST00000240803.2	Crnde-208	1110	No protein	-	lncRNA	-
ENSMUST00000347396.1	Crnde-301	1097	No protein	-	lncRNA	-
ENSMUST00000246423.2	Crnde-240	1094	No protein	-	lncRNA	-
ENSMUST00000347358.1	Crnde-264	1093	No protein	-	lncRNA	-
ENSMUST00000347357.1	Crnde-263	1092	No protein	-	lncRNA	-
ENSMUST00000347450.1	Crnde-355	1091	No protein	-	lncRNA	-
ENSMUST00000347458.1	Crnde-363	1091	No protein	-	lncRNA	-
ENSMUST00000347345.1	Crnde-251	1090	No protein	-	lncRNA	-
ENSMUST00000347371.1	Crnde-276	1083	No protein	-	lncRNA	-
ENSMUST00000347412.1	Crnde-317	1076	No protein	-	lncRNA	-
ENSMUST00000347370.1	Crnde-275	1075	No protein	-	lncRNA	-
ENSMUST00000347416.1	Crnde-321	1074	No protein	-	lncRNA	-
ENSMUST00000347359.1	Crnde-265	1073	No protein	-	lncRNA	-
ENSMUST00000347398.1	Crnde-303	1054	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347433.1	Crnde-338	1050	No protein	-	lncRNA	-
ENSMUST00000347428.1	Crnde-333	1048	No protein	-	lncRNA	-
ENSMUST00000347434.1	Crnde-339	1046	No protein	-	lncRNA	-
ENSMUST00000347438.1	Crnde-343	1036	No protein	-	lncRNA	-
ENSMUST00000347344.1	Crnde-250	1035	No protein	-	lncRNA	-
ENSMUST00000347386.1	Crnde-291	1030	No protein	-	lncRNA	-
ENSMUST00000347418.1	Crnde-323	1024	No protein	-	lncRNA	-
ENSMUST00000347423.1	Crnde-328	1017	No protein	-	lncRNA	-
ENSMUST00000347431.1	Crnde-336	1009	No protein	-	lncRNA	-
ENSMUST00000347400.1	Crnde-305	1006	No protein	-	lncRNA	-
ENSMUST00000347405.1	Crnde-310	1005	No protein	-	lncRNA	-
ENSMUST00000242039.2	Crnde-214	1003	No protein	-	lncRNA	-
ENSMUST00000347388.1	Crnde-293	1000	No protein	-	lncRNA	-
ENSMUST00000347352.1	Crnde-258	999	No protein	-	lncRNA	-
ENSMUST00000347432.1	Crnde-337	997	No protein	-	lncRNA	-
ENSMUST00000347362.1	Crnde-267	991	No protein	-	lncRNA	-
ENSMUST00000347410.1	Crnde-315	988	No protein	-	lncRNA	-
ENSMUST00000347354.1	Crnde-260	987	No protein	-	lncRNA	-
ENSMUST00000347381.1	Crnde-286	985	No protein	-	lncRNA	-
ENSMUST00000243333.1	Crnde-221	974	No protein	-	lncRNA	-
ENSMUST00000347379.1	Crnde-284	971	No protein	-	lncRNA	-
ENSMUST00000347364.1	Crnde-269	969	No protein	-	lncRNA	-
ENSMUST00000347397.1	Crnde-302	969	No protein	-	lncRNA	-
ENSMUST00000347377.1	Crnde-282	968	No protein	-	lncRNA	-
ENSMUST00000347389.1	Crnde-294	968	No protein	-	lncRNA	-
ENSMUST00000243235.2	Crnde-219	967	No protein	-	lncRNA	-
ENSMUST00000347383.1	Crnde-288	966	No protein	-	lncRNA	-
ENSMUST00000347375.1	Crnde-280	963	No protein	-	lncRNA	-
ENSMUST00000347387.1	Crnde-292	952	No protein	-	lncRNA	-
ENSMUST00000347415.1	Crnde-320	949	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347337.1	Crnde-243	946	No protein	-	lncRNA	-
ENSMUST00000347380.1	Crnde-285	942	No protein	-	lncRNA	-
ENSMUST00000347422.1	Crnde-327	941	No protein	-	lncRNA	-
ENSMUST00000243221.2	Crnde-218	932	No protein	-	lncRNA	-
ENSMUST00000347404.1	Crnde-309	932	No protein	-	lncRNA	-
ENSMUST00000246112.2	Crnde-235	925	No protein	-	lncRNA	-
ENSMUST00000242768.2	Crnde-216	923	No protein	-	lncRNA	-
ENSMUST00000347343.1	Crnde-249	922	No protein	-	lncRNA	-
ENSMUST00000244697.2	Crnde-226	911	No protein	-	lncRNA	-
ENSMUST00000347456.1	Crnde-361	904	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347426.1	Crnde-331	903	No protein	-	lncRNA	-
ENSMUST00000243275.1	Crnde-220	897	No protein	-	lncRNA	-
ENSMUST00000347382.1	Crnde-287	887	No protein	-	lncRNA	-
ENSMUST00000347427.1	Crnde-332	882	No protein	-	lncRNA	-
ENSMUST00000347413.1	Crnde-318	870	No protein	-	lncRNA	-
ENSMUST00000347435.1	Crnde-340	857	No protein	-	lncRNA	-
ENSMUST00000347437.1	Crnde-342	856	No protein	-	lncRNA	-
ENSMUST00000347414.1	Crnde-319	855	No protein	-	lncRNA	-
ENSMUST00000246333.2	Crnde-238	853	No protein	-	lncRNA	-
ENSMUST00000245426.2	Crnde-231	848	No protein	-	lncRNA	-
ENSMUST00000246134.1	Crnde-236	846	No protein	-	lncRNA	-
ENSMUST00000347368.1	Crnde-273	840	No protein	-	lncRNA	-
ENSMUST00000347403.1	Crnde-308	824	No protein	-	lncRNA	-
ENSMUST00000347350.1	Crnde-256	822	No protein	-	lncRNA	-
ENSMUST00000243977.2	Crnde-222	818	No protein	-	lncRNA	-
ENSMUST00000179421.11	Crnde-206	808	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000241773.2	Crnde-212	808	No protein	-	lncRNA	-
ENSMUST00000347409.1	Crnde-314	805	No protein	-	lncRNA	-
ENSMUST00000246244.2	Crnde-237	802	No protein	-	lncRNA	-
ENSMUST00000347453.1	Crnde-358	797	No protein	-	lncRNA	-
ENSMUST00000241610.2	Crnde-210	796	No protein	-	lncRNA	-
ENSMUST00000246430.1	Crnde-241	786	No protein	-	lncRNA	-
ENSMUST00000347356.1	Crnde-262	786	No protein	-	lncRNA	-
ENSMUST00000347369.1	Crnde-274	783	No protein	-	lncRNA	-
ENSMUST00000347346.1	Crnde-252	780	No protein	-	lncRNA	-
ENSMUST00000347454.1	Crnde-359	771	No protein	-	lncRNA	-
ENSMUST00000347430.1	Crnde-335	768	No protein	-	lncRNA	-
ENSMUST00000347462.1	Crnde-367	747	No protein	-	lncRNA	-
ENSMUST00000347338.1	Crnde-244	744	No protein	-	lncRNA	-
ENSMUST00000180102.8	Crnde-207	732	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000347459.1	Crnde-364	725	No protein	-	lncRNA	-
ENSMUST00000347401.1	Crnde-306	710	No protein	-	lncRNA	-
ENSMUST00000347455.1	Crnde-360	692	No protein	-	lncRNA	-
ENSMUST00000347347.1	Crnde-253	688	No protein	-	lncRNA	-
ENSMUST00000241029.2	Crnde-209	683	No protein	-	lncRNA	-
ENSMUST00000347411.1	Crnde-316	681	No protein	-	lncRNA	-
ENSMUST00000244713.2	Crnde-227	678	No protein	-	lncRNA	-
ENSMUST00000347355.1	Crnde-261	651	No protein	-	lncRNA	-
ENSMUST00000347447.1	Crnde-352	645	No protein	-	lncRNA	-
ENSMUST00000347439.1	Crnde-344	637	No protein	-	lncRNA	-
ENSMUST00000179029.4	Crnde-203	636	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000347451.1	Crnde-356	632	No protein	-	lncRNA	-
ENSMUST00000347429.1	Crnde-334	631	No protein	-	lncRNA	-
ENSMUST00000347457.1	Crnde-362	630	No protein	-	lncRNA	-
ENSMUST00000347460.1	Crnde-365	610	No protein	-	lncRNA	-
ENSMUST00000347436.1	Crnde-341	608	No protein	-	lncRNA	-
ENSMUST00000347351.1	Crnde-257	603	No protein	-	lncRNA	-
ENSMUST00000347402.1	Crnde-307	570	No protein	-	lncRNA	-
ENSMUST00000347353.1	Crnde-259	550	No protein	-	lncRNA	-
ENSMUST00000347452.1	Crnde-357	522	No protein	-	lncRNA	-
ENSMUST00000347461.1	Crnde-366	498	No protein	-	lncRNA	-
ENSMUST00000347349.1	Crnde-255	489	No protein	-	lncRNA	-