Gene: Kif20b ENSMUSG00000024795

Description

kinesin family member 20B [Source:MGI Symbol;Acc:MGI:2444576]

Gene Synonyms

33cex, C330014J10Rik, Kif20b, Mphosph1, N-6 kinesin, magoo

Location

Chromosome 19: 34,899,761-34,953,145 forward strand.

GRCm39:CM001012.3

About this gene

This gene has 10 transcripts (splice variants), 265 orthologues and is associated with 26 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000087341.7	Kif20b-201	5564	1774aa	ENSMUSP00000084599.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37967	Q80WE4-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000223907.2	Kif20b-203	5423	1734aa	ENSMUSP00000153034.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q80WE4-3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSMUST00000223776.2	Kif20b-202	740	207aa	ENSMUSP00000152994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCI2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000225151.2	Kif20b-208	573	136aa	ENSMUSP00000153181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCY3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000224728.2	Kif20b-207	4352	51aa	ENSMUSP00000153020.2	Nonsense mediated decay		A0A286YCJ8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000223937.2	Kif20b-204	788	214aa	ENSMUSP00000153193.2	Nonsense mediated decay		A0A286YCY2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000225408.2	Kif20b-209	547	40aa	ENSMUSP00000153592.2	Nonsense mediated decay		A0A286YE94	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000224603.2	Kif20b-206	687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000224381.2	Kif20b-205	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225625.2	Kif20b-210	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Kif20b ENSMUSG00000024795

Strains

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Kif20b ENSMUSG00000024795

Strains

About Us

Get help

Our sister sites

Follow us