Gene: Arap3 ENSMUSG00000024451

Description

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:MGI Symbol;Acc:MGI:2147274]

Gene Synonyms

Centd3, DRAG1, E030006K04Rik

Location

Chromosome 18: 38,105,681-38,132,022 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 9 transcripts (splice variants), 197 orthologues, 24 paralogues and is associated with 23 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000042944.9	Arap3-201	5219	1538aa	ENSMUSP00000035662.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29196	Q8R5G7-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237272.2	Arap3-208	5359	1460aa	ENSMUSP00000157868.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8R5G7-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000236588.2	Arap3-205	683	124aa	ENSMUSP00000157916.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA67	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000236534.2	Arap3-204	464	154aa	ENSMUSP00000158060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAF2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000236134.2	Arap3-203	434	47aa	ENSMUSP00000157951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000237188.2	Arap3-207	3601	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000237677.2	Arap3-209	3880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000236772.2	Arap3-206	1556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235391.2	Arap3-202	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-