Gene: Impact ENSMUSG00000024423

Description

impact, RWD domain protein [Source:MGI Symbol;Acc:MGI:1098233]

Gene Synonyms

E430016J11Rik

Location

Chromosome 18: 13,088,909-13,126,007 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 9 transcripts (splice variants), 208 orthologues and is associated with 28 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025290.7	Impact-201	3763	318aa	ENSMUSP00000025290.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29068	O55091	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234035.2	Impact-202	687	203aa	ENSMUSP00000157188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC12	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000235053.2	Impact-208	591	178aa	ENSMUSP00000157223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4L314	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234409.2	Impact-204	509	104aa	ENSMUSP00000157328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EIE8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234763.2	Impact-206	475	129aa	ENSMUSP00000157250.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4L328	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234369.2	Impact-203	634	83aa	ENSMUSP00000157113.2	Nonsense mediated decay		A0A3Q4L2V8	-
ENSMUST00000235079.2	Impact-209	642	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234793.2	Impact-207	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234488.2	Impact-205	431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Impact ENSMUSG00000024423

Strains

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Gene: Impact ENSMUSG00000024423

Strains

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