Gene: Proc ENSMUSG00000024386

Description

protein C [Source:MGI Symbol;Acc:MGI:97771]

Gene Synonyms

PC, inactivator of coagulation factors Va, VIII

Location

Chromosome 18: 32,256,179-32,272,623 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 8 transcripts (splice variants), 103 orthologues, 18 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000234651.2	Proc-206	1575	460aa	ENSMUSP00000157269.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29116	P33587	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000171765.2	Proc-201	1566	460aa	ENSMUSP00000132226.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29116	P33587	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000234386.2	Proc-204	781	214aa	ENSMUSP00000157122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EBY5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234375.2	Proc-203	614	177aa	ENSMUSP00000157207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC18	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234657.2	Proc-207	558	86aa	ENSMUSP00000156986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGI8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234746.2	Proc-208	719	51aa	ENSMUSP00000157002.2	Nonsense mediated decay		A0A3Q4EGJ8	-
ENSMUST00000234198.2	Proc-202	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234649.2	Proc-205	659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Proc ENSMUSG00000024386

Strains

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Gene: Proc ENSMUSG00000024386

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