Gene: Sting1 ENSMUSG00000024349

Description

stimulator of interferon response cGAMP interactor 1 [Source:MGI Symbol;Acc:MGI:1919762]

Gene Synonyms

2610307O08Rik, ERIS, MPYS, Sting, Tmem173

Location

Chromosome 18: 35,866,732-35,873,607 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 10 transcripts (splice variants), 183 orthologues and is associated with 36 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000115728.5	Sting1-201	2299	378aa	ENSMUSP00000111393.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50253	Q3TBT3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237919.2	Sting1-210	2134	378aa	ENSMUSP00000157408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50253	Q3TBT3-1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000235495.2	Sting1-205	2086	337aa	ENSMUSP00000157789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3TBT3-3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000235302.2	Sting1-204	657	125aa	ENSMUSP00000157565.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9A3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000237405.2	Sting1-208	342	45aa	ENSMUSP00000157516.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B980	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000235218.2	Sting1-203	334	111aa	ENSMUSP00000158511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBL9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000237853.2	Sting1-209	1025	204aa	ENSMUSP00000158306.2	Nonsense mediated decay		A0A494BB43	-
ENSMUST00000235496.2	Sting1-206	1320	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000236926.2	Sting1-207	776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235173.2	Sting1-202	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Sting1 ENSMUSG00000024349

Strains

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Sting1 ENSMUSG00000024349

Strains

About Us

Get help

Our sister sites

Follow us