Gene: Eci1 ENSMUSG00000024132

Description

enoyl-Coenzyme A delta isomerase 1 [Source:MGI Symbol;Acc:MGI:94871]

Gene Synonyms

Dci, eci

Location

Chromosome 17: 24,645,615-24,658,322 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues, 9 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000234304.2	Eci1-205	1137	289aa	ENSMUSP00000157291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28480	P42125	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000234023.2	Eci1-203	1108	248aa	ENSMUSP00000157160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC00	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000024946.7	Eci1-201	1086	286aa	ENSMUSP00000024946.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A452J8A5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234150.2	Eci1-204	633	128aa	ENSMUSP00000157319.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC76	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000234019.2	Eci1-202	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234731.2	Eci1-206	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235124.2	Eci1-207	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Eci1 ENSMUSG00000024132

Strains

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Gene: Eci1 ENSMUSG00000024132

Strains

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