Gene: Nudt13 ENSMUSG00000021809

Description

nudix hydrolase 13 [Source:MGI Symbol;Acc:MGI:1914975]

Gene Synonyms

4933433B15Rik, nudix (nucleoside diphosphate linked moiety X)-type motif 13

Location

Chromosome 14: 20,344,765-20,367,646 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 16 transcripts (splice variants), 191 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022343.6	Nudt13-201	2494	352aa	ENSMUSP00000022343.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36815	Q8JZU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223663.2	Nudt13-203	1633	352aa	ENSMUSP00000153558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36815	Q8JZU0	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000224311.2	Nudt13-207	1574	322aa	ENSMUSP00000153615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q80VI7	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000223941.2	Nudt13-204	793	197aa	ENSMUSP00000153437.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YE01	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000224066.2	Nudt13-205	670	137aa	ENSMUSP00000153582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDW4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000225314.2	Nudt13-211	1589	146aa	ENSMUSP00000153266.2	Nonsense mediated decay		A0A286YCV5	-
ENSMUST00000224169.2	Nudt13-206	857	146aa	ENSMUSP00000153164.2	Nonsense mediated decay		A0A286YCV5	-
ENSMUST00000225722.2	Nudt13-215	2473	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225354.2	Nudt13-212	681	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000224354.2	Nudt13-208	2815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000224377.2	Nudt13-209	976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225442.2	Nudt13-214	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000224674.2	Nudt13-210	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225440.2	Nudt13-213	695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000223566.2	Nudt13-202	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225728.2	Nudt13-216	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-