Gene: Nacc1 ENSMUSG00000001910

Description

nucleus accumbens associated 1, BEN and BTB (POZ) domain containing [Source:MGI Symbol;Acc:MGI:1914080]

Gene Synonyms

2010001H03Rik, 4930511N13Rik, Btbd14b, Nac1

Location

Chromosome 8: 85,397,108-85,414,531 reverse strand.

GRCm39:CM001001.3

About this gene

This gene has 5 transcripts (splice variants), 260 orthologues, 25 paralogues and is associated with 36 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000001975.6	Nacc1-201	4344	514aa	ENSMUSP00000001975.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22475	Q7TSZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238434.2	Nacc1-203	1117	372aa	ENSMUSP00000158606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BEI5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000238449.2	Nacc1-204	792	187aa	ENSMUSP00000158624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BFZ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000238301.2	Nacc1-202	784	223aa	ENSMUSP00000158781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BER1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000238687.2	Nacc1-205	403	64aa	ENSMUSP00000158582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BE53	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,