Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm31645 ENSMUSG00000117358

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Description

predicted gene, 31645 [Source:MGI Symbol;Acc:MGI:5590804]

Location

Chromosome 17: 74,826,650-74,835,402 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000243853.2	Gm31645-205	561	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000242418.2	Gm31645-204	1458	No protein	-	lncRNA		-
ENSMUST00000244807.1	Gm31645-206	1407	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234433.2	Gm31645-202	1389	No protein	-	lncRNA		-
ENSMUST00000234285.3	Gm31645-201	854	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000235009.4	Gm31645-203	813	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284248.1	Gm31645-219	608	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284237.1	Gm31645-208	572	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284236.1	Gm31645-207	563	No protein	-	lncRNA		-
ENSMUST00000284240.1	Gm31645-211	525	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284239.1	Gm31645-210	522	No protein	-	lncRNA		-
ENSMUST00000284243.1	Gm31645-214	518	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284238.1	Gm31645-209	511	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284245.1	Gm31645-216	499	No protein	-	lncRNA		-
ENSMUST00000284242.1	Gm31645-213	460	No protein	-	lncRNA		-
ENSMUST00000284247.1	Gm31645-218	448	No protein	-	lncRNA		-
ENSMUST00000284241.1	Gm31645-212	436	No protein	-	lncRNA		-
ENSMUST00000284246.1	Gm31645-217	360	No protein	-	lncRNA		-
ENSMUST00000284244.1	Gm31645-215	340	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data