Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: 1600002D24Rik ENSMUSG00000117232

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Description

RIKEN cDNA 1600002D24 gene [Source:MGI Symbol;Acc:MGI:1917026]

Location

Chromosome 16: 95,557,741-95,730,277 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000233116.2	1600002D24Rik-202	629	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232930.2	1600002D24Rik-201	1855	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269197.1	1600002D24Rik-205	978	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000283556.1	1600002D24Rik-207	863	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327297.1	1600002D24Rik-212	827	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000233770.2	1600002D24Rik-204	763	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269198.1	1600002D24Rik-206	700	No protein	-	lncRNA		-
ENSMUST00000327295.1	1600002D24Rik-210	696	No protein	-	lncRNA		-
ENSMUST00000327301.1	1600002D24Rik-216	543	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327293.1	1600002D24Rik-208	501	No protein	-	lncRNA		-
ENSMUST00000327300.1	1600002D24Rik-215	480	No protein	-	lncRNA		-
ENSMUST00000327294.1	1600002D24Rik-209	475	No protein	-	lncRNA		-
ENSMUST00000327296.1	1600002D24Rik-211	470	No protein	-	lncRNA		-
ENSMUST00000327299.1	1600002D24Rik-214	455	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327303.1	1600002D24Rik-218	454	No protein	-	lncRNA		-
ENSMUST00000327302.1	1600002D24Rik-217	447	No protein	-	lncRNA		-
ENSMUST00000233375.2	1600002D24Rik-203	416	No protein	-	lncRNA		-
ENSMUST00000327298.1	1600002D24Rik-213	383	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data