Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: 4930578N18Rik ENSMUSG00000116695

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Description

RIKEN cDNA 4930578N18 gene [Source:MGI Symbol;Acc:MGI:1925465]

Location

Chromosome 16: 75,919,438-75,952,982 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 18 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000232455.3	4930578N18Rik-202	582	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000265226.1	4930578N18Rik-215	873	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265228.1	4930578N18Rik-217	849	No protein	-	lncRNA		-
ENSMUST00000265222.1	4930578N18Rik-211	830	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265223.1	4930578N18Rik-212	814	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265221.1	4930578N18Rik-210	781	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265224.1	4930578N18Rik-213	781	No protein	-	lncRNA		-
ENSMUST00000265225.1	4930578N18Rik-214	736	No protein	-	lncRNA		-
ENSMUST00000231285.3	4930578N18Rik-201	648	No protein	-	lncRNA		-
ENSMUST00000265216.1	4930578N18Rik-205	604	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265227.1	4930578N18Rik-216	577	No protein	-	lncRNA		-
ENSMUST00000265218.1	4930578N18Rik-207	547	No protein	-	lncRNA		-
ENSMUST00000265217.1	4930578N18Rik-206	541	No protein	-	lncRNA		-
ENSMUST00000265214.1	4930578N18Rik-203	535	No protein	-	lncRNA		-
ENSMUST00000265219.1	4930578N18Rik-208	528	No protein	-	lncRNA		-
ENSMUST00000265220.1	4930578N18Rik-209	524	No protein	-	lncRNA		-
ENSMUST00000265215.1	4930578N18Rik-204	491	No protein	-	lncRNA		-
ENSMUST00000265229.1	4930578N18Rik-218	388	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data