Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: 9630013A20Rik ENSMUSG00000115529

.

Description

RIKEN cDNA 9630013A20 gene [Source:MGI Symbol;Acc:MGI:2442953]

Gene Synonyms

lncOL1

Location

Chromosome 14: 84,696,079-84,713,864 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 6 transcripts (splice variants), 1 orthologue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000228857.2	9630013A20Rik-205	2341	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000226704.2	9630013A20Rik-202	2136	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000228125.2	9630013A20Rik-204	2038	No protein	-	lncRNA		-
ENSMUST00000226618.2	9630013A20Rik-201	1172	No protein	-	lncRNA		-
ENSMUST00000226890.2	9630013A20Rik-203	1126	No protein	-	lncRNA		-
ENSMUST00000305910.1	9630013A20Rik-206	1043	No protein	-	lncRNA		-

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data